Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02794 ATGTCAATTTGGAACAACCTACCCTTAGATCTCTTAGCCAAAATCTTCTCCTTTCTCTCCCCAGATTCACTGGCCATAGCAAGATCAGTTTGCAAGACATGGCACACTTGTTCCAAAGCATATCCTCTATCCCCAACAACCTCAACAACGACAACAACCTCTTCATGGTTCCTGGCTCTTCCAATTCGCAACCACAGAGCATCTTGTTATGCTCACAATCCAACCATAGACAAATGGCACCAACTCTCTCTGCCACTGCCATCCATTCGACCAATTGCTTCAATCGGAAGCCTCCTCCTCTTGAGGGTCACCAATTCCACAAACCTCCAATTGGGTCTCAGCAACCCCTTCACCGGAGAGTTCAAGCACCTTCCCCGGCTGCACGCGGCAAGGACCAACCCCGCCGTCGGAGTCACAGTCTCGGAGTCTTCGAGTTCAACTCTGTTCCCTTCGTTTAAAGTCTACGTGGCAGGTGGCATGTCGGAGGCAGCGGAAGGTGGCGCAAAGTACGAAACGAAGGTGGAGATGTACGACTCGAGGATCGAGACGTGGCGGATTGTGGGGTCGACGCCGGTGGAATTCGCGGTGAGACTGACGGTGTGGACACCCAATGAGAATGTGTGCATTGGAGAAACTCTGTATTGGGTAACCTCGGCGAGAGCGTACAGTGTTGTGGGATATGATGTTGGGAGAAATGGGTGGAGGGAAGTGGGTGTGCCCATGGCTGAAAAGCTTGAGTTTGCATCGCTTGTGAAGAGAAACGGAGCATTGGGATTGGTGGGTGGAACTTGCGGCGGAAGTGGTTGCATTTGGGGGCTGAGCGAAGGAGACAAATGGTGCTTGATCGATGAGGTGCCATTTGAATTGGGGTTGAGATTGTTGGGAGGGAAGAGAGTTTGGGAGAGTGTGAAGTGTGTTGGCAATGATGATTGTATCTGTTTGTACAGAGATCTTGGTTCTGGCATGGTGGCTTGCAGAAGGGTTGGCTGGGAATGGGTTTGGGTTTGGATTTATGGCTGTGATTACATCAAGGGAAAACCATTGCTCAATTCTCCCATAAGAGGAGCACTTCTTCATCCCACTCTTGCTTCTTCTCTTATCTGTTGA 1107 0.505 MSIWNNLPLDLLAKIFSFLSPDSLAIARSVCKTWHTCSKAYPLSPTTSTTTTTSSWFLALPIRNHRASCYAHNPTIDKWHQLSLPLPSIRPIASIGSLLLLRVTNSTNLQLGLSNPFTGEFKHLPRLHAARTNPAVGVTVSESSSSTLFPSFKVYVAGGMSEAAEGGAKYETKVEMYDSRIETWRIVGSTPVEFAVRLTVWTPNENVCIGETLYWVTSARAYSVVGYDVGRNGWREVGVPMAEKLEFASLVKRNGALGLVGGTCGGSGCIWGLSEGDKWCLIDEVPFELGLRLLGGKRVWESVKCVGNDDCICLYRDLGSGMVACRRVGWEWVWVWIYGCDYIKGKPLLNSPIRGALLHPTLASSLIC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02794 368 SUPERFAMILY F-box domain 2 65 IPR036047 GO:0005515
Vimu11g02794 368 SMART fbox_2 7 46 IPR001810 GO:0005515
Vimu11g02794 368 Gene3D - 4 42 - -
Vimu11g02794 368 ProSiteProfiles F-box domain profile. 1 36 IPR001810 GO:0005515
Vimu11g02794 368 Gene3D - 61 289 IPR015915 GO:0005515
Vimu11g02794 368 Pfam F-box domain 4 39 IPR001810 GO:0005515
Vimu11g02794 368 Pfam Kelch motif 153 189 IPR006652 GO:0005515
Vimu11g02794 368 CDD F-box_SF 5 39 - -
Vimu11g02794 368 PANTHER BNACNNG10540D PROTEIN 2 325 - -
Vimu11g02794 368 SUPERFAMILY Kelch motif 66 288 IPR015915 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02794 - - gmx:100783227 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02794 11 48089686 48090792 Vimu11g02794 11 48089686 48090792 ECH