Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02780 ATGCAAGGTAGAGGAGAGTGGTGGAGAAGAGCATGGCTGAGATGGAAGCCATGTTTGGAGAACAGAGGAAAAAGGTTGTCTTTCGAAGAGAACGAGGACAATAGAACTTGTGTTGACCATAAAAGGAAGAGACGTATAAATAATGAACAGAAAGAAATAGTGTCCCTATTCACGAAGCTTCATGGCTGGCCTACACTGAGCGCCACAGTGGATGTGCCATCAAAAGGAGTAGCAACAAAAGGTAACTCAGTAAGGAAACCTAGTTCATCAGAGGATTTCTGGACCACCAGCACGCATGATATGGACAACAGTGCCGTTCAGTCACAGGGGAGCATCTCTTCAGCCAGTCTTACAAACCAAGCTGTGGTTCCTCATGCTAGTTCTTCCAAAAACAGCAGCAACCCCACTGAATTTGTAAATCATGGTCTAATTCTTTGGAATCAGACTCGGCAACGCTGGGTTGGAAATAAAAAATCTGAAAACCGAACACAACAATTACGAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTTGGGAGCAACAAGCCTTTCCGTCAGCCTATCCCTCTTGCAGAAATGGTAGATTTTCTTGTGGACATCTGGGAGCAGGATGGCCTATACGACTGA 636 0.4434 MQGRGEWWRRAWLRWKPCLENRGKRLSFEENEDNRTCVDHKRKRRINNEQKEIVSLFTKLHGWPTLSATVDVPSKGVATKGNSVRKPSSSEDFWTTSTHDMDNSAVQSQGSISSASLTNQAVVPHASSSKNSSNPTEFVNHGLILWNQTRQRWVGNKKSENRTQQLREPKLSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02780 211 PANTHER OS07G0479600 PROTEIN 64 211 - -
Vimu11g02780 211 MobiDBLite consensus disorder prediction 75 135 - -
Vimu11g02780 211 Pfam Protein of unknown function (DUF4050) 170 211 IPR025124 -
Vimu11g02780 211 Pfam Protein of unknown function (DUF4050) 97 169 IPR025124 -
Vimu11g02780 211 MobiDBLite consensus disorder prediction 81 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02780 Vimu-Chr11 48005299 48014771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02780 - - gmx:547651 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01027 7 10000413 10001772 Vimu11g02780 11 48005299 48014771 ECH
Vimu11g02780 11 48005299 48014771 Vimu11g02780 11 48005299 48014771 ECH