Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02779 ATGGCTTTGGCACGTTTGGCTTTGAAAGATTTGCGAGGAAGGTTGTTTGCTTCATCTTCCTTCAGCAGCCATGGTTCTGGTGGCTTGCACAAGCAGAGATGGAACAATGAATTGCTCAAAAGGTTTGCCACTGCAGCAGGTGATAAAGGAAAATCTGAAGCCACCGAAGTTGCTGTCACTGAAGGGAAAAAGTCTAAAGGGTTGTTCCCCAGAAGGAGGAACAGAAGATGGATTTGGAGAAACCATGATCGTGATTTCCCTCCAGCTCTCTATGAGTTTTTTCCTTCAGGGCTTGGGAATGCACTGATGCAGGCAAGTGAGAACATCAATAGGGTGTTTGAGAACATGAATCTGACACCTTGGTCTCTGAGTGGTCGTGTGAAAGAGAGAGATGATCATTACAAACTGAGGTATGAGATGCCAGGAATGGCAAAAGAGGAGGTGAAGATCACCATTGATGATGGGGTGTTGACAATAAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGAGAAGATGATGAGTATTGGTCTTCAAGTAGCTATGGATACTATAACACAAGCCTGGTTTTGCCTGATGATGCTAAGGCTGATGACATTAAAGCAGAGTTGAAGGATGGTGTCTTAATTGTCACCATTCCTAGGACTGAGAAACCCAAAAAGGATGTGAAACAAGTCACAGTAGAATGA 687 0.441 MALARLALKDLRGRLFASSSFSSHGSGGLHKQRWNNELLKRFATAAGDKGKSEATEVAVTEGKKSKGLFPRRRNRRWIWRNHDRDFPPALYEFFPSGLGNALMQASENINRVFENMNLTPWSLSGRVKERDDHYKLRYEMPGMAKEEVKITIDDGVLTIKGEHKEEKEEGEDDEYWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLIVTIPRTEKPKKDVKQVTVE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02779 228 FunFam 26.5 kDa heat shock protein, mitochondrial 91 227 - -
Vimu11g02779 228 CDD ACD_sHsps-like 127 214 - -
Vimu11g02779 228 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 227 IPR044587 GO:0009408
Vimu11g02779 228 Gene3D - 92 228 IPR008978 -
Vimu11g02779 228 SUPERFAMILY HSP20-like chaperones 112 227 IPR008978 -
Vimu11g02779 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 228 IPR002068 -
Vimu11g02779 228 Pfam Hsp20/alpha crystallin family 127 227 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02779 Vimu-Chr11 48002469 48003629 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02779 K13993 - gmx:100787482 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02779 11 48002469 48003629 Vimu11g02779 11 48002469 48003629 ECH