Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02778 ATGAAAAGACTGAACAGTGAAAAGAGAGGAGAAAGAAGAAATGTGATGTGTACCTTATATGATGAGGTCACTGTGTTCATCCCTCAACAGTTACGTGCAGTCCAGTGCAAGCATGAGACTGTCTTCCCTCCTAGCCGTAGGATTCATCCACCTTGTGATTGGAGAGATCTTGTGTGTGCTGTGTACTTGCTCCCATCTTTTGGGAGATTGTGCATGACACTCAGCAGCAGCAACAGTAAATCTCAACACCCTGTGTCAGATCTAGAAGGAGATAGGGCATACACCAGTGGATCGCTGACGTTGGACACAAAAAAGAGTTTGGAGCAACGTAGAATGGTAATAGGGTCAAAGCCTCCTGCTTGTGTGAACAAGTGCAAGAGTTGCAGGCCTTGCATGGCTACTCTGGTAGTTCCAAACCACCAGAAGAGGAAGAAGGGTTTCAGAGTTTTCTCTCATAGGGATGATGATGATACTTATTATCTTCTTTCGTGGAAATGCAAATGTGGTGATAAGCTGTTTCAACCATAA 528 0.4451 MKRLNSEKRGERRNVMCTLYDEVTVFIPQQLRAVQCKHETVFPPSRRIHPPCDWRDLVCAVYLLPSFGRLCMTLSSSNSKSQHPVSDLEGDRAYTSGSLTLDTKKSLEQRRMVIGSKPPACVNKCKSCRPCMATLVVPNHQKRKKGFRVFSHRDDDDTYYLLSWKCKCGDKLFQP 175
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02778 175 Pfam Epidermal patterning factor proteins 113 175 - -
Vimu11g02778 175 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 73 175 IPR039455 GO:0010374
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu11g02778 Vimu-Chr11 47999002 48001583 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02778 - - gmx:102664177 141.739