Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02776 ATGGAGAGCGAACCGCAGAGTGCAGGAAAAGATGAGGTTTTATCGGTTGAGCTATCTGCTCCTTCTGCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGGAAAAGTGAGATTGTATTCGTAGCTCCTACTGGGGAAGAGATCACTTCCAAAAAGCAGTTGGAGCAGTACCTGAAGGCACATCCTGGGAATCCTGCCATCTCGGAGTTTGACTGGGGAACCGGTGAGACCCCTCGACGATCGGCACGGATTAGCGAGAAGGTCAAATCAACCCCACCGGCGGAGACCGAGCCACCAAGGAAAAGATCCCGGAAATCGTCAGGTTCTTCAAAGAAGGATAGCAAAGAAAGCGAATCCGCCACTGAAGAATCGAAACCAGATCCTGATGAAATTGATAACAACAACGCAAAAAAGACTGATACAGAGGAGATTGATAACAGTAATGCTGAAGTGCAAAATGCAGCAGCTGAAAAACCTGAGGGAGGAGAAGAAGCATTGTTGGTAGAGTCAGAGGAGAAATTTGCAGGGGAAGCTTTGAATACTGAGGAGGCAACTGAAAAACCCCAAGAGAAGGAGGATGTCACTGAGAAGCCTGAGGAGCAGGAGGGCACTGAAAAACCCCAAGAAGTGGATGAGGCAGCAGGAAGTGCATCAGGAAAAGAAAATGGCACAGTTGATGACAGTAAGCAAGACATAGCAGATAGTGTGATTCCTGATGCGAATGGAGGAGCTGAGAAAGTGAAGCAGAACCAAGATGTTGAGGAAAAGAACGGTACAACAGAAATCCCTGTAAGTGATGGAAAGAACAGCATTCAAGCTGAGGAGCAAGTAAATAAAATGGTTGACAACGGACAAGTTATTTGGAGCTGTGCTCAGTGA 888 0.4673 MESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEIVFVAPTGEEITSKKQLEQYLKAHPGNPAISEFDWGTGETPRRSARISEKVKSTPPAETEPPRKRSRKSSGSSKKDSKESESATEESKPDPDEIDNNNAKKTDTEEIDNSNAEVQNAAAEKPEGGEEALLVESEEKFAGEALNTEEATEKPQEKEDVTEKPEEQEGTEKPQEVDEAAGSASGKENGTVDDSKQDIADSVIPDANGGAEKVKQNQDVEEKNGTTEIPVSDGKNSIQAEEQVNKMVDNGQVIWSCAQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02776 295 SUPERFAMILY DNA-binding domain 9 104 IPR016177 GO:0003677
Vimu11g02776 295 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Vimu11g02776 295 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Vimu11g02776 295 Coils Coil 140 160 - -
Vimu11g02776 295 Gene3D - 12 85 - -
Vimu11g02776 295 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 273 IPR039622 -
Vimu11g02776 295 MobiDBLite consensus disorder prediction 96 148 - -
Vimu11g02776 295 MobiDBLite consensus disorder prediction 62 273 - -
Vimu11g02776 295 MobiDBLite consensus disorder prediction 165 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02776 Vimu-Chr11 47985875 47988158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02776 - - vun:114166886 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02776 11 47985875 47988158 Vimu11g02776 11 47985875 47988158 ECH