Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02775 ATGTTAAATTTTAACCATGTTTTGATATGCTTGTGTGGTGCAGTTTTGGGGGATAAAGTATTTACTGGAACGTATGGAGTGAACTATGGAAGGATTGCAGACAATCTACCTTCTCCTCAGAGTGTGGTTACTCTTCTGAAAGCTGCAAAGATTAGGAACATCAGAATATATGATGCTGATCATCAAGTTCTGAGTGCCTTCAAAGGGTCAGGGATTGGAATTATCATTGGGCTACCAAATGAGTTTCTGAGAGACATAAGTCAAGGAGAGGATCGTGCCATGAACTGGATCAAAGAAAATGTTCAGCCATTTCTTCCAGGAACCAGAATTCGTGGCATTGCAGTGGGGAATGAAATACTAGGAGGAGGAGACATGGAGCTGTGGGAAGTTTTGCTGCCAGCAGCTAAAAATGTTTACACTGCACTTGCTAGGCTCAATCTGCAACATCAAATTCAGGTGTCAAGTCCACATTCCGAGGCTGTCTTCGCAAACTCCTACCCTCCATCTGCATGCACTTTCAGGGACGATGTGCTTCCTTTCATGAAACCCCTTTTGCAATTCTTCTCACAAATCGGCACTCCTTTCTACATAAACGCATACCCCTTCTTGGCCTACAAGAATGACCCTCAACACATTGACATAAACTACGCTCTCTTCAAGAAAAATCCAGGAATTTACGATGCCAAGACTAAACTGCACTACGACAACATGTTCATGGCTCAAATCGATGCAGCTTACGCAGCCTTGGAGAAGGTTGGCTTCGACAAGATGGAAGTCATTGTTTCCGAGACCGGTTGGGCCTCTCGTGGTGATGACAATGAAGCTGGTGCAACAGTGAAAAATGCAAAGACTTACAACAAAAACTTGAAGAAGCTTTTGATGAAGAAAAAGGGTACCCCTTATAGGCCTAAGATGGTTGTGAGAGCTTATATTTTTGCTTTGTTTAACGAGAATTTGAAGCCTGGTCCAACATCTGAGAGAAACTTTGGATTGTTCAAACCAGATGGCAGCATTGCTTATGACATAGGTTTCACAGGACTCACTTCATCAGCAATTTCCTTCAAGGGTGTTGGATCTTTGTATGTAATGGTTTCTGCAAGCTGTGCTGCTTTTCTTCTTCTTGTAGCATTATAA 1134 0.4259 MLNFNHVLICLCGAVLGDKVFTGTYGVNYGRIADNLPSPQSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQPFLPGTRIRGIAVGNEILGGGDMELWEVLLPAAKNVYTALARLNLQHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFDKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLMKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSAISFKGVGSLYVMVSASCAAFLLLVAL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02775 377 FunFam Glucan endo-1,3-beta-glucosidase 14 23 349 - -
Vimu11g02775 377 Gene3D Glycosidases 24 349 - -
Vimu11g02775 377 Pfam Glycosyl hydrolases family 17 26 344 IPR000490 GO:0004553|GO:0005975
Vimu11g02775 377 SUPERFAMILY (Trans)glycosidases 25 343 IPR017853 -
Vimu11g02775 377 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 347 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02775 Vimu-Chr11 47982739 47984619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02775 21 368 Glycoside Hydrolase AT3G15800 74.857 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02775 - - vra:106773873 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02775 11 47982739 47984619 Vimu11g02775 11 47982739 47984619 ECH