Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02772 ATGCTTGGTTTGGGTGCCGACCTCTTGTGGGCCGACATGAACCGTCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTATCCGAGGTTGTTAACATCTATTTCCATGAATCCGAAAAGCTTCTCACCAGTCTCAGAGCTTCGCTCATGGAGAGGGAGTTTTCGGATTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGTAGCTCCAGCATTGGCGCGAAAAGAGTTAGAAACGTTTGCGTTGCATTTCGTGCTGCTGCTGAGCAGAATAACCGTGCTGGGTGGGTGCCATTTTGCCAAACTATTCCAATCACTATTCCCTCTGATTTCGTGCAACTTTTTCACTCTCTAACTCTCCATCGCCACTACCCTTTTTCCATTTCTTCTAATCATCTCACACTTTATCCATTTATTGCAATATTCCCTTTTGCAAATGTTCGTGTTCGCACGTTCTCATATTTTGGAATATTAAAATACTGTGTCTTTACGATGCCTCGCTCAATCATGAGCACTTTCAAAATTGTGTTTCCATATCTGTTAATAGCCATTGCCAATTCTAACACACAGCTATTTTGCAGCTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAGTACTGCTATCTCAAGAACAAATTGCATGAATTGTTTCAGGTAATATTGAGCAGCAACGAGCTTTGGCTGCAGGAGTTAGATACCCAGTGCAGGATTAGCAAAAAGATGAAATCTTTGTAG 795 0.4377 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLTSLRASLMEREFSDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAAAEQNNRAGWVPFCQTIPITIPSDFVQLFHSLTLHRHYPFSISSNHLTLYPFIAIFPFANVRVRTFSYFGILKYCVFTMPRSIMSTFKIVFPYLLIAIANSNTQLFCSCLRALEMLEHEYCYLKNKLHELFQVILSSNELWLQELDTQCRISKKMKSL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02772 264 Pfam Hpt domain 47 111 IPR008207 GO:0000160
Vimu11g02772 264 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 123 IPR036641 GO:0000160
Vimu11g02772 264 FunFam Histidine-containing phosphotransfer protein 1 4 134 - -
Vimu11g02772 264 Gene3D HPT domain 6 245 IPR036641 GO:0000160
Vimu11g02772 264 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 239 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02772 Vimu-Chr11 47962915 47964147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02772 K14490 - gmx:100789608 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02772 11 47962915 47964147 Vimu11g02772 11 47962915 47964147 ECH