Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02756 ATGTCGTCCGAGGATGTGTTCATTGGCGCCATCGACCAAGGTACGACCAGCAGCAGGTTCATAATCTACGACGGATCGAGTAAAGCAATCGGAATCCACCACGTGGAGTTCACGCAGTTCTACCCGCAACCCGGGTGGGTGGAGCATGACCCGATGGAGATCTTGGAGAGCGTGAAGGTGTGCGTGGCAAAAGCCGTCGACAAGGCCACCGCCGATGGCTTCAACGTCGACAAGGGACTCAAGGCCATCGGTCTCACCAATCAGAGAGAAACCGCTCTCGTCTGGAGCAAATCCACCGGTCTCCCTTTCTACAACGCCATCGTTTGGATGGATGCTCGTACTTCTTCCATTTGCAGCAGGAGACTGGAAAATGAGTTATCCGGCGGTAGAAACCATTTTGTGGAGAGGTGTGGCTTGCCTATTAGCACATATTTCAGTGCAGTGAAATTACTGTGGCTGATAGAAAATGTGAAAGCTGTGAAAGAGGCTATAGAGAAAAAGGATGCGCTGTTTGGAACTATAGATACTTGGTTGATATGGAATTTAACTGGTGGGGTGAAGGGGGGATTGCATGTTACTGATGTTTCTAACGCATCTCGGACAATGTTCATGAATCTAAAAACCCTGCAGTGGGACGAAACTATATTAGAAACTCTTAAAATTCCTGCTGAAATTTTGCCTAAAATTGTTAGTAATTCTGAAGTTATAGGAGATATTGCGGCTGGATGGCCAATTACTGGTATCCCTATTGCTGGATGTTTAGGGGATCAACATGCTGCCATGTTAGGACAATCATGCCGTGAGGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTTATATTACTGAATACTGGTGAAGGGATAGTTAAATCAAAACACGGTCTTCTAACCACATTAGCCTACAAGCTTGGCCCAAATGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACGGTCTTGGCCTCATTTCCTCTGCTTCGGAGATAGAGGAGCTGGCATCACAGGTTGAATCCACTGGTGGGATTTACTTTGTTCCTGCTTTTAGTGGTTTGTTTGCTCCATGGTGGCGTGATGATGCTCGTGGTGTTATTGTTGGGATGACAAGGATCACAAACAAAGCTCACATTGCTCGAGCTGTGCTTGAGAGCATGTGTTTCCAAGTGAAGGACGTCTTGAATTCAATGCATAAAGATTCAACACTAGATTCCAAAGAGATATCTTTGCTTAGAGTGGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGATTCAGGCAGATTTGTTGGGAAGTTCAGTAGTTAGACCTGTTGACATAGAGACCACAGCACTTGGAGCAGCCTATGCTGCAGGGTTGGCTATTGGGGTTTGGAAAGAAGAACATATTTTCAATTCCCAGGAAAGGATGAAGAATGCTAAAGTTTTCCGTCCCATAATGACTGAGGAAGTAAGGAAAAAGAAGTTTGAATCTTGGTGCAAAGCTGTTAGTAAAACTTTTGACTTAGCTGATCTTGCTCTTTGA 1557 0.456 MSSEDVFIGAIDQGTTSSRFIIYDGSSKAIGIHHVEFTQFYPQPGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETALVWSKSTGLPFYNAIVWMDARTSSICSRRLENELSGGRNHFVERCGLPISTYFSAVKLLWLIENVKAVKEAIEKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMFMNLKTLQWDETILETLKIPAEILPKIVSNSEVIGDIAAGWPITGIPIAGCLGDQHAAMLGQSCREGEAKSTYGTGAFILLNTGEGIVKSKHGLLTTLAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLISSASEIEELASQVESTGGIYFVPAFSGLFAPWWRDDARGVIVGMTRITNKAHIARAVLESMCFQVKDVLNSMHKDSTLDSKEISLLRVDGGATVNNLLMQIQADLLGSSVVRPVDIETTALGAAYAAGLAIGVWKEEHIFNSQERMKNAKVFRPIMTEEVRKKKFESWCKAVSKTFDLADLAL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02756 518 NCBIfam glycerol kinase GlpK 7 511 IPR005999 GO:0004370|GO:0006072
Vimu11g02756 518 PIRSF GlpK 5 517 IPR000577 GO:0005975|GO:0016301
Vimu11g02756 518 SUPERFAMILY Actin-like ATPase domain 267 511 IPR043129 -
Vimu11g02756 518 FunFam Glycerol kinase 265 513 - -
Vimu11g02756 518 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 263 IPR018484 GO:0005975|GO:0016301
Vimu11g02756 518 SUPERFAMILY Actin-like ATPase domain 8 266 IPR043129 -
Vimu11g02756 518 Gene3D - 2 263 - -
Vimu11g02756 518 PANTHER SUGAR KINASE 7 512 - -
Vimu11g02756 518 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 144 156 IPR018483 GO:0005975|GO:0016773
Vimu11g02756 518 Gene3D - 265 512 - -
Vimu11g02756 518 FunFam Glycerol kinase 5 264 - -
Vimu11g02756 518 Pfam FGGY family of carbohydrate kinases, C-terminal domain 271 465 IPR018485 GO:0005975|GO:0016301
Vimu11g02756 518 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 374 394 IPR018483 GO:0005975|GO:0016773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02756 K00864 - gmx:547750 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02756 11 47865688 47869366 Vimu11g02756 11 47865688 47869366 ECH