Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02751 ATGGATTCCAATAATTGGAGACCTAATCAAGGTAATAACCCCACTATGGATCCAAACGACTGGAGAGCTCAACTACCACCAGAATCACGTCAAAGAATTGTCAACAAAATAATGGACACATTAAAAAAACACCTTCCTTTTTCTGGTCCTGACGGATTGCAAGATCTTCATAAGATTGCTAAAAGGTTTGAAGAAAAGATTTTTACTGCTGCAACAAGCCAGCCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGAGTAAGTCCCAAAACAACCTGCCTAACACTCAAGTTGGCCCTAGCAATAAACCTACCGATCAAGGACTTGTTTTGCAGCCTCAAGTTCATAATCTTGGGCAACAACATTCTGTTCCTTTGTCTAGTCAGATGCAGTCACATCAGCAGCTTCTATCTCAAAATGTTCAAAATAATGTTGCATCTCAACCTAACCTTCCACCTGTATCTAGTCTAGGCCAGACTCCCAGCCAAAATATTGTCCAGAACTCTAACATACAGAATATACCTGGGCCAAATTCAGTTGGAAGCACTATTAGCCAAAATTCCAACTTACAGAGTATGTTTCCTGGTTCTCAGAGAACAATGCCAGGAAGGCAGCAGGTTGGTCCCCCACAACAGCAGCTGCAATCACAGAGTCCACAGCAATATCTTTACCAGCAGCAGTATCTGAAGCAGAAGCTTCAGCAGCAACAACAGCAAAGCCTTATGCAACCAAATCAGTTGCAATCTTCTCAGCAATCTACTAGTATTCAACAGTCAATGCAGTCCATGCCTCAGCAACATTCACAAGTTATGAGGCATCAACAACAACAGACTTCTATGGTACATCAGCAACAAACACCGGTCACTCAACAGACAATCTTACCTGCACAACAACAACAACTTATGGGACCTCAGTCAAATGCAGCAAACATGCAACATTCACAGATGCTCGGGCAACAGAACAATGTTGGTGATATACAGCAACCTCAGAGGATGCTTTCACAGCAAAGTAATCTTACAAGCCTGCAACAACAGCGACAACAACAATTAATAAATCAGCAAAACAATCCAGCAAATGTACATCAACAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAGCATTTGCTTGGACCTGACTCTGGCAATGCAGACATGCACACAAGTCATCACTCTACACACATGTTGCAACAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAATTCGTTAAATTTGTTGCTACCTCATTCACAGCAGTCACAGCCACTGGGTTCACAACAGCAATTAATGCCTCAGATTCACACTCAGTCTACACAGTTGCAACAGCAATTGGGCTTGCAGCAGCAGCAGCCAAATCCCTCACAACGTGATATGCAGCAAAGAATTCAAACATCAGGATCCTTACTTCAACAAAGTGTTCTTGATCAACAAAAGCAGTTGTATCAATCTCAAAGAAATCTTTCAGAAACATCAGCAACTTCTCTGGATTCTACAACACAGTCTGCACAACCTAGTGGAAATGATTGGCAAGAAGAAGTTTACCAGAAGATCCAAGCCATGAAAGAAAGTTATTTGCCAGATATGAATGAAGTGTACCAAAAAGTTGCTAATAAACTTCAGCAGCATGATTCTATTCCCCAACAGTCGCAATCGGATCAGATTGATAAGCTGAGGGCATATAAAGTGTTGTTGGAGCGTATGATGACATTAGTACAGATTCCCAAGATCAACATTTCGCCTCAGTTGAAGGAAAAATTGGGATCATATGAGAAGCAGATTATAAGTCTCATAAATCAAAGTAGACCCAGGAAAAGCATGTCTTCTGTGCAGGTAGGACAGATTCCCCAAACCCATATGTCCTCCATGCAACAGCCCCAATCCCAGGTTTCACAATTACAGTCTCACGAAAATCAAATGAACTCTCAGCTGAAGTCAACAAATTTACAAGGTTCTGTGCCAACCATGCAGCAGAATAATATTGCAACCTCTCAGCACAATCCTTTGTCTGGTGTATCAGCAGGACAGCAGAATATGATGAATTCGATGCAACCTGGAGCAAATTTAGATTCTGGACAAGGAAATTCTGTGAACTCCCTTCAACATGTTCCAATGAACTCCATCCAGCAAACTCCTGTTAGTACTCCTCAACTACAGACTAACATTAATTCCTTACAATCACAAGGTGGGGCAAATGTCAGTCAACCAAATTCCCTTCAATCAGGTTCCAGTGCACTTCAACACCAACTGAAACATCAGGAACAGCAGATGCTGCAGAATCAGCAATTCAAACAATTTCAGCATCGACAAATGGTGCAGAGGCAGCTCTTTCAGCAGCAGCAACTACACCATCCAACGAAGCCACAGCTATCTGCACAATTGCAAACACATCAAATGTCCCAGCTTCACCAAATGAATGATATAAATGACTTAAAAATGAGACAAGGAATTGGTGTTAAGCCAGGAGTCTTTCAACAACATCTTACATCAGGTCAACACTCAGCATATTCCCATCAACAGCTGAAACAAGGGAATGCATTTCCTGTTTCTTCACCCCAACACCTTCAGGCTCCATCTCCTCAGATTCAGCAACATTCATCTCCCCAGGTTGAGCAACAAAATCATCTCCAGTCTAAATCTAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCCTTTGTAGGACCTACCCCTTCACCTCCTTTGGCTCCATCTCCTATGCCAGGGGAATCTGAGAAGTCCGTTCCCTGTGTTTCATCAATATCAAATGCTGCAAATATTGGACATCAACAAACAGGGGGTGCAGTAGCACCACCTCAATCCCTTGCCATTGGGACTCCTGGGATTTCAGCGTCTCCTTTATTGGCAGAATTCAGTGGTCAGGATGGTGCGCATGGCAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTCAGACAGAGCAGCCTCTTGAACGCCTAATTAACGTGGTAAAATCAATGTCATCTAAAGCATTAAGTGCTGCAATCAGTGATATTGGCTCAGTTGTCAGCATGAATGATAGAATAGCAGGATCAGCTCCAGGTAACGGATCCAGAGCAGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGCCTTCAGGCTCGAAATTTCATTACCCAAGATGGTACCAATGGAATTAAGAGGATGAAACGTTACACAAGTGCTATACCCTTGAATGGTGTATTATCTGCTGGTAGCATGAATGATAGCATCAAGCAGTTAACTGCTTCAGAGGCTTCTGATCTAGAGTCAACAGCAACATCCAGTGTCAAGAAACGGAAAATCGAGGTTAACCATGCCCTTTTGGAAGAAATAAGGGATATTAATCACCAACTTATCGACACAGTAGTAGACATAAGCAATGTTGATCCAACACCTGCTGTTGCAGCTGCTGAAGGAGCAGAAGGAATCCTTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCAGCGCAGATGTCACCTATTCAGCCTCTGCGTTTACTGGTTCCTGCAAATTATCCTAACTGTTCTCCGATACTCCTAGACAAATTTCCAGTTGAATCCTGTAAAGAGAACGAAGATCTTTCAGCCAAGGCAAAGGCAAAGTTCAGTATATCTTTGCGCAGTTTACCACAACCTATGTCACTTGGGGATATAGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCCCAACAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGTTTGACCACTAACTAG 3819 0.4271 MDSNNWRPNQGNNPTMDPNDWRAQLPPESRQRIVNKIMDTLKKHLPFSGPDGLQDLHKIAKRFEEKIFTAATSQPDYLRKISLKMLTMESKSQNNLPNTQVGPSNKPTDQGLVLQPQVHNLGQQHSVPLSSQMQSHQQLLSQNVQNNVASQPNLPPVSSLGQTPSQNIVQNSNIQNIPGPNSVGSTISQNSNLQSMFPGSQRTMPGRQQVGPPQQQLQSQSPQQYLYQQQYLKQKLQQQQQQSLMQPNQLQSSQQSTSIQQSMQSMPQQHSQVMRHQQQQTSMVHQQQTPVTQQTILPAQQQQLMGPQSNAANMQHSQMLGQQNNVGDIQQPQRMLSQQSNLTSLQQQRQQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSHHSTHMLQQPKVPMQQQSQQNSLNLLLPHSQQSQPLGSQQQLMPQIHTQSTQLQQQLGLQQQQPNPSQRDMQQRIQTSGSLLQQSVLDQQKQLYQSQRNLSETSATSLDSTTQSAQPSGNDWQEEVYQKIQAMKESYLPDMNEVYQKVANKLQQHDSIPQQSQSDQIDKLRAYKVLLERMMTLVQIPKINISPQLKEKLGSYEKQIISLINQSRPRKSMSSVQVGQIPQTHMSSMQQPQSQVSQLQSHENQMNSQLKSTNLQGSVPTMQQNNIATSQHNPLSGVSAGQQNMMNSMQPGANLDSGQGNSVNSLQHVPMNSIQQTPVSTPQLQTNINSLQSQGGANVSQPNSLQSGSSALQHQLKHQEQQMLQNQQFKQFQHRQMVQRQLFQQQQLHHPTKPQLSAQLQTHQMSQLHQMNDINDLKMRQGIGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLQAPSPQIQQHSSPQVEQQNHLQSKSKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKSVPCVSSISNAANIGHQQTGGAVAPPQSLAIGTPGISASPLLAEFSGQDGAHGNALAATSGKSTQTEQPLERLINVVKSMSSKALSAAISDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTNGIKRMKRYTSAIPLNGVLSAGSMNDSIKQLTASEASDLESTATSSVKKRKIEVNHALLEEIRDINHQLIDTVVDISNVDPTPAVAAAEGAEGILVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPNCSPILLDKFPVESCKENEDLSAKAKAKFSISLRSLPQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 425 467 - -
Vimu11g02751 1272 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 93 IPR036529 GO:0003712|GO:0006355
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 332 413 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 170 223 - -
Vimu11g02751 1272 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 488 515 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 243 280 - -
Vimu11g02751 1272 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 824 1261 IPR044661 GO:0003713|GO:0031490
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 851 898 - -
Vimu11g02751 1272 FunFam Mediator of RNA polymerase II transcription subunit 15a 20 98 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 1 19 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 668 705 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 1 24 - -
Vimu11g02751 1272 Pfam KIX domain 19 95 IPR036546 -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 731 767 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 851 921 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 624 649 - -
Vimu11g02751 1272 MobiDBLite consensus disorder prediction 785 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02751 Vimu-Chr11 47804911 47820188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02751 K14972 - gmx:100805336 1645.56