Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02749 ATGTCTTCTCTAAGATCCACCATGTCAAATGCTCCTTCTAAATCAACCTTTGACGAGCATCGATGGGTGATTCACATCCGGAAAACCCTCGAAGAAGAGCTCCAGGAAGATGCTGAATTTGCTGTATCCATCTTCAGTGTGCCCAAGCTTCTCATGGCAAGTGATCCTGACTCTTACGTCCCCCAACAGGTTGCGATCGGTCCTTACCATTATTGGCGTCCTGAGCTATATGAGATGCAAAGGTACAAGATTGCAGCTGCAAAAAGATTCCAGAAACGTCTACAAGGCTGCAACTTGGATACTCTGATCGATCAATTGACTAAGTTGGAGCAAAGGGTTCGATCATGCTACCACAAGTTTTTGGATTTCAACGGGGAAACACTGGTGTGGATGATGGCAGTTGACGCCTCCTTCTTGCTTGAGTTCCTTCAGGTTTATGCCATGCAGGAAGGAGCAAAGGTGCAAAGGGTTTCCAGCAGCATGTCGCATTTGGTGGACTATGCTGGGAAGAAATCAGCTCACAATGCGATTTTGAGAGACATTGTGATGCTTGAGAATCAAATCCCGTTATTTGTGTTGAGAAAGATGCTGGAGTTCAAATTCTCATCACTGGAAGCTGCTGATGACATGCTGAGCATGATGTTCATTGGGCTGTTCAAAGAGATTTCTCCGTTCAAAATGATGGAGGAGTATCCAAACATTCAGGTGTCAGAGAGCGTGCATTTGCTAGATTTCTTGTACGATGTGGTCGTGCCAAAATCAGAACAACAACCAGACACAATCGAAGCTGATCAGGTTCAACAAGAAGAAGAACAAAAGCAAAACGAAGAAGGAAGCTCAGACTTCAGCCATGTTAAGCAATTCTTCAGTGAACTATGGAAGCTTCTTTCAAAGTTAAACAAAGGGCCAGTGAAGTTAATAAAGAAGGTAATTTTGTCTAAACCTCTGAAAGTGTTTGTTCAGTTGCCTTGGAAAATCGTTTCCAACCTTCCAGGACTCAAGCTTCTGAAGCAACCTGTTGAATATTTCTTCTTCTCTCAAGAAAAAGGAGAAAGTGTGAGATCAAGCAGCAAAAGTCTCATGAACAAGCCACCCTCAGTGGAAGAAATCACGATTCCTTGTGTTACAGATCTCTTGAACTGTGGTGTTCGTTTTGTAGCTACTGCTGGAAGCATATCAAACATCAGTTTTGACACCAAAACTCGAACTTTTTATCTTCCCACAATAGGTTTGGATGTGAACAGTGAAGTTTTCCTGAGAAACTTGGTTGCGTATGAAGCATCGGTTGCATCGGGGCCGTTGGTTATAACCCGTTACACAGAGTTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAAGATTCTGAGAGAAAAAGGGATAATTCTGAACCATTTGAAGAGTGATAAAGAGGTGGCTAACCTGTGGAATGGAATGAGCAAGTCGTTGAGATTGTCAAGGGTGGCAGAATTGGACAAAGTGATTGAAGATGTTAACAAGTATTATAACTGTAGATTGAAGGTTAAAGTTTTGAAGTTCATGAAGGCTTATGTGTTTAGTTCTTGGCAGTTTTTGACATTCCTTGCTGCCATATGCCTCTTGCTCTTGATGGCTTTGCAAGCTTTCTGCTCTGTCTACACTTGCACTCGTTTTTTCCAATCTGCACTCAATTCCACTGATTAA 1683 0.4254 MSSLRSTMSNAPSKSTFDEHRWVIHIRKTLEEELQEDAEFAVSIFSVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKIAAAKRFQKRLQGCNLDTLIDQLTKLEQRVRSCYHKFLDFNGETLVWMMAVDASFLLEFLQVYAMQEGAKVQRVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPLFVLRKMLEFKFSSLEAADDMLSMMFIGLFKEISPFKMMEEYPNIQVSESVHLLDFLYDVVVPKSEQQPDTIEADQVQQEEEQKQNEEGSSDFSHVKQFFSELWKLLSKLNKGPVKLIKKVILSKPLKVFVQLPWKIVSNLPGLKLLKQPVEYFFFSQEKGESVRSSSKSLMNKPPSVEEITIPCVTDLLNCGVRFVATAGSISNISFDTKTRTFYLPTIGLDVNSEVFLRNLVAYEASVASGPLVITRYTELMNGIIDSEEDAKILREKGIILNHLKSDKEVANLWNGMSKSLRLSRVAELDKVIEDVNKYYNCRLKVKVLKFMKAYVFSSWQFLTFLAAICLLLLMALQAFCSVYTCTRFFQSALNSTD 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02749 560 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 37 545 IPR004158 -
Vimu11g02749 560 MobiDBLite consensus disorder prediction 258 281 - -
Vimu11g02749 560 Pfam Plant protein of unknown function 44 536 IPR004158 -
Vimu11g02749 560 MobiDBLite consensus disorder prediction 266 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02749 Vimu-Chr11 47788097 47790440 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02749 - - vun:114165667 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02749 11 47788097 47790440 Vimu11g02749 11 47788097 47790440 ECH