Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02739 ATGTCAGAAGAAGAATTACACTTACCTCGTGAATGCTGGGAATTGGTATTCAAATTCCTCAAACCCATTCCTCATTACGAACCTCTCTCCCTTGTCTCAACCCAATTCCTCTCCATCACCAACCTCCTCCGATCCTCACTTACCATATCCAACCCTACGCTTCCCTTTCTCCCCAACCTCTTCCGAAGGTTCCCATCCATCACCTCTCTTCATATCACGCGCCTCCACCACTCCCACCTCTACACGCTCCTCCTCCAGCTCTCACGCGCCGCCCTACCGCTCCAATCCCTCAACCTCTCATGCCACCCCTCCCTCCCCTCAAATGGGTTGCGCGCGTTCGCCCGAAAGATCCCAACTTTGAAATCCCTCACCTGCTCCCACATGGCTTGTCTCCGAAACGCCGATCTCCTTCTAATAGGTGATTGTTTCCCTTTCCTCGAACATCTCGACCTCAGTTTCCCTGAAAATAACGACAATTCACCCGACCCAGTTTCCGATTTCGGCGTAAAGGCTCTCTCTTTGGCCCTTCCCAAGCTCCGTAGCGTTAACCTCTCCGGCAATTACTTCATCAGCGACACTTCCATTCTCAGTCTCTGCAAGAACTGCGAGCTTCTCGAGGAAATTATAATCTTCGAGTGCCACTTCATCACGCAGCGTGGCATCGCTTCCGCGATTCGTGAAAGACCGTGTTTGCGTTCTTTCTGCGTTAGCAATTTTGGGTATGGAACAAAGAAGGGTGACATTGCCAGACCCTATGTGACTTCTGATTTCATCAGTGCGTTGGTGGGTTTAAAGGGCTTGACTTGTCTCGATTTGTCATGTTCTTCTATCTCTGATGAGTTGCTATGCTGTGTTGCGGAGGAAGGGATTCCTCTGAAGAAGCTTGTTTTACAAGGTTGTTGTAACTACACTTACGTTGGAGTGTTGTGCTTGTTGTCCTCATGTCAGTCAATGGAGCATTTGGATCTTCAAAACACCGAGTTTCTTTGTGATCGGCGTGTGGAAGTGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTCAGTGGTTGTAGGACGTTAACTGATTTAGCTTTGCTTGCACTCATTAAGAACTGTCCTTTGTTGAATGAGATCAAAATGGAGGCAACAGATGTTGGGAAGAAGGGGGTGGATGAGGAGTTAGTGAAAGGTATTGTGAATTATCGAGTGAAGTCTCTCTATTTGGGAAGAAACTCCTGGTTGAGGGATGAAAGCGTTGAAATGATTGCTTCTGTTTGCCCCAGTTTGGAGGTGCTTGATTTGAGTTCTTGCTGTGACATATCTGAAGGTGTTGTTGAGGTTTTGAGGAGGTGTAGCGAGGTTAGGAATTTGAGCTTGGCCTTTTGTTCAGGAGTGAAGTTAAAAGGGCTGGAATTTGAAGTTCCAAAACTAGAGGAGTTGAACTTGTCAGGATCAAGAGTTGATGATGAAACACTTTCTGTGATCTCAAAGTGTTGTCGTTGGTTGCTGCATTTGGACTTGGAAAATTGCTATAAGGTCACAGGCAATGGAGTTAGGGAAGTGGTGGAGAACTGCAGGCGATTGAGGGAGATTAATTTGGTGTCTTGTTGTGAAGTGGAAGCTAGTGTTGTAGCTTTGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGGCCCCTCCGAGTTTTGATCTTGGTGGTGGCCAGAGGGAATTTCTCTTGCGTCATGGCTGCATAGTTAGCTTGTCTGCAATGAAGTCTGAAATGGAGAATGTTTTTGCTTCCTTGAGCTGCTTCTCTGAGAAATTGAAGTTGGATAAAGAAGGGAGAAGATGA 1821 0.464 MSEEELHLPRECWELVFKFLKPIPHYEPLSLVSTQFLSITNLLRSSLTISNPTLPFLPNLFRRFPSITSLHITRLHHSHLYTLLLQLSRAALPLQSLNLSCHPSLPSNGLRAFARKIPTLKSLTCSHMACLRNADLLLIGDCFPFLEHLDLSFPENNDNSPDPVSDFGVKALSLALPKLRSVNLSGNYFISDTSILSLCKNCELLEEIIIFECHFITQRGIASAIRERPCLRSFCVSNFGYGTKKGDIARPYVTSDFISALVGLKGLTCLDLSCSSISDELLCCVAEEGIPLKKLVLQGCCNYTYVGVLCLLSSCQSMEHLDLQNTEFLCDRRVEVLCEFLGNLVSINVSGCRTLTDLALLALIKNCPLLNEIKMEATDVGKKGVDEELVKGIVNYRVKSLYLGRNSWLRDESVEMIASVCPSLEVLDLSSCCDISEGVVEVLRRCSEVRNLSLAFCSGVKLKGLEFEVPKLEELNLSGSRVDDETLSVISKCCRWLLHLDLENCYKVTGNGVREVVENCRRLREINLVSCCEVEASVVALMVFSRPSLRRIMAPPSFDLGGGQREFLLRHGCIVSLSAMKSEMENVFASLSCFSEKLKLDKEGRR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02739 606 Gene3D Ribonuclease Inhibitor 384 464 IPR032675 -
Vimu11g02739 606 SMART LRR_CC_2 421 445 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 289 314 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 202 227 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 469 493 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 341 366 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 91 116 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 494 519 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 176 201 IPR006553 -
Vimu11g02739 606 SMART LRR_CC_2 520 544 IPR006553 -
Vimu11g02739 606 Gene3D Ribonuclease Inhibitor 17 362 IPR032675 -
Vimu11g02739 606 SUPERFAMILY RNI-like 255 536 - -
Vimu11g02739 606 PANTHER UNCHARACTERIZED 8 280 - -
Vimu11g02739 606 FunFam F-box/LRR-repeat protein 20 467 554 - -
Vimu11g02739 606 Pfam Leucine Rich repeat 421 435 IPR001611 GO:0005515
Vimu11g02739 606 Gene3D Ribonuclease Inhibitor 465 553 IPR032675 -
Vimu11g02739 606 SUPERFAMILY RNI-like 45 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02739 Vimu-Chr11 47704847 47706691 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02739 K10268 - gmx:100819538 901.353