Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02735 ATGTCATCATCCTCAACCTCTCCGAGAGAGAACCAGAAACTGAGAACGCAAAAGGAAGAAAAACGCGTGTTTGGGTTGTCTATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCTATTCCACTCCCACCGCCACCGATCTCTTCCGCTCCGTTTATTCCCATCATTTCTTCCTACCCACTACCTGTCCTGCCGTTATGAATATGTTGTGTAGGGTTAGTGATGGACTGCTTGCCACATTTGTTTCCAGCAACAAAAGGTCTCCTTATTGTGCTTCTTGTCAGCCCTCAACAGTACAGTGGTGGTACGGGTTAGCTTGTGATGTAAGTGTGGCAGTGGAAGTCAGAAGCTCAAGTAATGGTGGCTCTGGGAATTTCTTGTTGATTATGTTGCTTCATTTAACGAGTAGAAATGGTTTGTGTGAAATTTCTGATGGTCTTGGCACAGGGAAATGCATGAGTCATATGCTGACTTGTGAGGTAGAGGATATGGACGAATGGAAGAGAGGCTTAAAAGCATTAAGGGCCGATACAATTAGTAAATTGAGGAAGGCACTTTCAGACCTAGAAAAGGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACCCTTGTTTTGGGTTCAACATTTCCGTCCCAAGTCAACTCATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGCAATGAGATAAGTTATCCATCCCTTGATGACTATGATCCTGAGCTTGCCTGGCCTTTAATCCTGGACAATTTCGTTGAATGGCGGTTGGCGACAGCTAAATCAGACAGACAACATAGTGATGCATTCAACTTCTCTGTGATTGGCCAAATCAAAAAGAAAAAAGAAAAGATTTTGGGCATTCGTGAAGATCACGAAGAAGACCCAACAATCAACGGTGAAGGAGGAGGGAGTGGGCGTCGGGTTCTACTCCTTCCCCTGCGCCCTCTCGCAGGGGATGGTGTTGAAGTTGGTTTCTTTCCCTCACTCGCCAAAGCTTCCTTTTCTCCCTCACATGGCTTCTCTTCCATTCTTGAGGTACCACTCACCGATTCTGGCAAGACGATTGACCCAACTTGGAATCGGATTTCCGAAATGGTTGCAATTTTTGGTGATGAGATTGTAAGCGTTTCCTCTGTATTCAGAGGCGAGTTCTTCCATAACCGTCTTCACCTCACCGGGTCCCATGTCGGTTTTTCCGATCAGAATCGTTTTTCTGAAAGTGAAACCTTCGCACCTCCTTGGTTCCCCCTCGAATATCCCCGTCGACGGATACTCGTGAGCCCCGAAGGCGAATTCAACGCCAATAAAGAGGAAATAGAGCGACCCAGAAAGCTTTTTTTCCTTGCGGATGTAGATCTGAGGTGGGTTCTTGCTGAGATTCAAAAGGGAAAAAAGAAACAACGAACCTTGCACGCCGGAATGGTAAACTCCGAGGCCGAACCAGTAAGCGTAACCGTTCATCGGTGTCAGATCGTATACGTTGAGCGACGCCGTTTTTTGAGCTCTTCCTGCACAGCATTCTGTTGCCGCGTTTTGATTCGCAAAACGGCAACTACTTCATCGCCGTTTCACGCGGAAGAAAAAGAAAAAGAAAAAGAAGAAGAAGAAGAAGAAGCAGTTCAATACGAAATGAAGGTGGAGGCTTTTTCTCACCAGAGAGTATCAAGAAAGGCCCTGGTTGTGTTAGCTAGTGGGTTCCACGGCGGTGGGTGGTGGCGGTGGCGCATATATAGTGTGTTACATACGCATGAAAATGTATTTATAAATGAAGGTTTTGGAATTGGAGTGAAATTACGTTTGTGCCTGAAGCATGAGCTGGTGTGGTATTGGGTGTAG 1899 0.4544 MSSSSTSPRENQKLRTQKEEKRVFGLSMRRSSASKKTGQSYSTPTATDLFRSVYSHHFFLPTTCPAVMNMLCRVSDGLLATFVSSNKRSPYCASCQPSTVQWWYGLACDVSVAVEVRSSSNGGSGNFLLIMLLHLTSRNGLCEISDGLGTGKCMSHMLTCEVEDMDEWKRGLKALRADTISKLRKALSDLEKEEKQKSIDIESICELLTLVLGSTFPSQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISYPSLDDYDPELAWPLILDNFVEWRLATAKSDRQHSDAFNFSVIGQIKKKKEKILGIREDHEEDPTINGEGGGSGRRVLLLPLRPLAGDGVEVGFFPSLAKASFSPSHGFSSILEVPLTDSGKTIDPTWNRISEMVAIFGDEIVSVSSVFRGEFFHNRLHLTGSHVGFSDQNRFSESETFAPPWFPLEYPRRRILVSPEGEFNANKEEIERPRKLFFLADVDLRWVLAEIQKGKKKQRTLHAGMVNSEAEPVSVTVHRCQIVYVERRRFLSSSCTAFCCRVLIRKTATTSSPFHAEEKEKEKEEEEEEAVQYEMKVEAFSHQRVSRKALVVLASGFHGGGWWRWRIYSVLHTHENVFINEGFGIGVKLRLCLKHELVWYWV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02735 632 Coils Coil 176 200 - -
Vimu11g02735 632 Pfam Cullin binding 187 275 IPR005176 -
Vimu11g02735 632 ProSiteProfiles DCUN1 domain profile. 192 277 IPR005176 -
Vimu11g02735 632 Coils Coil 546 573 - -
Vimu11g02735 632 Gene3D Cullin, PONY binding domain 182 282 IPR042460 -
Vimu11g02735 632 MobiDBLite consensus disorder prediction 12 26 - -
Vimu11g02735 632 PANTHER RP42 RELATED 146 193 IPR014764 -
Vimu11g02735 632 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02735 Vimu-Chr11 47680408 47689660 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02735 K17824 - gmx:100776788 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02735 11 47680408 47689660 Vimu11g02735 11 47680408 47689660 ECH