Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02731 ATGGAGGTTCCGAGTTCCTGGGATGCCCTTCGCAAGCAGGTTCTTAATTTTCTATTTTTGTGCTTTCTTTTTCAGATTATGCATCTGGTTTTTCCTCCAAATCTCTTTCAGGCGAGAAAACTTGAAGCTCAGTTAGATGAGCAGATGAATTCTTATCGTAAATTGGTTTCTGCGAATGTTTCTTCAAAAGCTGATGCCTCAGAGAGTGATCTAGAGTCTTGGATTGAGCGATTACTAAAACAACTTCAACAAGTAAATGCACAGATGCAAGCTTGGGTGTCAGCTGGTGGTTCAGAAATGGTTTCTCACACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAATTTTATCGTCTTCGTTCGAGTCTTCTAGCTAAGCAAGAACATGCTTCACTGCTGGAAGATTTTAAAGAATTTGATCGGACAAGATTAGACTTGGAACAAGGTGTAGACACTGAACAGCATGCACTCCTAAAAGAGCGTGCATCTATCAGCCGAAGTACAGGACATATGGACAACGTTATTTCACAAGCACAAGCAACACTAGGAGCACTTGTCTTCCAACGCTCAACATTTGGCGGTATCAATTCGAAGCTTGGCAACGTTAGCAGTCGCCTCCCTACGGTAAATAATATACTTTCGGCTATAAAGAGGAAAAAGTCAATGGATACCATCATACTTTCCCTTGTTGCAGCCGTATGCACATTTCTCATTTTCATCTACTGGCTATCCAAGTGA 747 0.415 MEVPSSWDALRKQVLNFLFLCFLFQIMHLVFPPNLFQARKLEAQLDEQMNSYRKLVSANVSSKADASESDLESWIERLLKQLQQVNAQMQAWVSAGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLLAKQEHASLLEDFKEFDRTRLDLEQGVDTEQHALLKERASISRSTGHMDNVISQAQATLGALVFQRSTFGGINSKLGNVSSRLPTVNNILSAIKRKKSMDTIILSLVAAVCTFLIFIYWLSK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02731 248 Coils Coil 75 95 - -
Vimu11g02731 248 PANTHER GOS-28 SNARE- RELATED 4 247 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Vimu11g02731 248 Pfam Snare region anchored in the vesicle membrane C-terminus 159 223 - -
Vimu11g02731 248 Coils Coil 38 58 - -
Vimu11g02731 248 PIRSF Golgi_SNARE 1 17 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Vimu11g02731 248 PIRSF Golgi_SNARE 36 247 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02731 Vimu-Chr11 47656837 47660832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02731 K08495 - gmx:100797885 395.201