Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02718 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCGATCGCCGACCCCGACGCGCGTCCAGTGCTCGTCCCGGCAGGCAACAAAGTCCGACCTGCAGTCGAAGGTCGCAAGCCGGTGAAGAAATTGACGCCGGAGACAGAGAAGAAGCCGGTGGCGCTTTCAAATGCGCCACCGCAATGCATCTCTGCTCCTCCACCGTTTATTTTGCGGCGGCAGGAGCGTCACCAGGCCGTGCTGAAAAACCTGTCTTCGATGAACGCTTCGTACTCCTCCGACGCGTCGTCGACTGATTCCTCCACTCACAGTAGCGGCGCGTCGTCAAGCGGGAAGGTGGCTCGTCGGGTTAGCGTGCAGTTGAGGAAGAAGCAGTGTGGCCCCAAGGCAGAGAAGGTGAGTAGTGACAATGTGGGTGGTTCTGATGATGTCGATTTGAGTGATAGCTTGGAGGGCAAGAAACGGTGTGCTTGGGTTACACCAAATACAGAGCCATGCTATGTTGCTTTTCATGACAACGAATGGGGAGTTCCTGTTCATGACGACAGGAAACTGTTTGAGTTGCTTAGCTTCTCTGGAGCCTTGGCTGAGCTTACGTGGCCTACTATTCTTAACAAAAGGCAGCTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAGTGCTGTTTCTAGAATGAATGAGAAAAAGATAGCTGCACCAGGAAGTCCTGCCAACTCATTGTTATCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGATCTTTTGACACATTTATTTGGAACTTTGTTAACCACAAGCCTATAGTTAGCCAATTCAGGTACTCACGTCAGGTACCTGTGAAATCTCCAAAAGCTGAAGTCATAAGTAAAGACCTTGTAAAGAGAGGTTTCAGGAGTGTTGGACCAACAGTCATCTACACTTTCATGCAAGTGGCTGGCCTAACAAATGACCATCTTATCAGTTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAGCCATGGCCAACGAAAGCTCCCTCAACTCCAAGCTCAAAGACAAGCCAAACGACGAGACAACTGATGTAGGCCTGTTACTGGCTGTGAACAAAATGAACTTCTCCTCTAAGTAG 1143 0.4926 MSGPPRVRSMNVAIADPDARPVLVPAGNKVRPAVEGRKPVKKLTPETEKKPVALSNAPPQCISAPPPFILRRQERHQAVLKNLSSMNASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKAEKVSSDNVGGSDDVDLSDSLEGKKRCAWVTPNTEPCYVAFHDNEWGVPVHDDRKLFELLSFSGALAELTWPTILNKRQLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNHKPIVSQFRYSRQVPVKSPKAEVISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAEAMANESSLNSKLKDKPNDETTDVGLLLAVNKMNFSSK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02718 380 Gene3D Hypothetical protein; domain 2 152 335 - -
Vimu11g02718 380 MobiDBLite consensus disorder prediction 22 60 - -
Vimu11g02718 380 PANTHER OS04G0501200 PROTEIN 6 345 - -
Vimu11g02718 380 Pfam Methyladenine glycosylase 161 334 IPR005019 GO:0006284|GO:0008725
Vimu11g02718 380 MobiDBLite consensus disorder prediction 88 114 - -
Vimu11g02718 380 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Vimu11g02718 380 MobiDBLite consensus disorder prediction 88 145 - -
Vimu11g02718 380 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02718 Vimu-Chr11 47587253 47591680 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02718 K01246 - gmx:100805836 602.053