Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02702 GTTAGAGAGTGGAAAAAGAAGCAAGAAGACATATCTTTTGGACATTATAGCAGAGACATGGAGCAGTTGGAGTCTGTGGCGTTCTTCGTATTCTGCACCACAATATTTGCTTCGGCTACTGCTTCTCCACACCAAGGGGCGAGTTACCTCAAGATGGTGGTCAATGCCACCGAGTTGCCACCGGAAGACTACTACGACTACATCGTCGTCGGTGGCGGCACTGCGGGGTGCCCACTGGCGGCGACGCTCTCGCAGTCGTTTCGGGTGCTTGTGCTGGAAAGAGGAGGCGTTGGGACCGGGAACCCCGACCTCATCAACCAAGAAGGGTTCTTGAGCAACCTCTTGAACGCCGAGAATGAGGACTCGCCGGCCCAGGCTTTCATTTCTGAAGAGGGAGTGCCCAACGCCCGCGGCCGGGTTCTTGGCGGCAGCAGCGCCATCAACGCGGGCTTCTACAGCCGAGCTCACCGAGATTTCTTCGTGAAGTCGGGGTTGCCCTGGGACCTGGCGCTGGTGAACCACTCCTACAGGTGGGTGGAGAAGGAAATCGTGTTCAGACCCAACCTCAAGACGTGGCAATCCGCGGTTCGAGATGGGTTGCTGGAAGCAGGGGTCACTCCCTACAATGGTTTCACTCTGGACCACGCCAAGGGGACCAAGATTGGGGGCTCCACCTTCGACAGCTCTGGCACCAGACACACCTCTGCGGATCTTCTCAGGCACGCTCGTTCATCAAACATCAAGGTCGCCGTTCACGCCACCGTAGAGAGGTTGCTTCTGGCGGGCTCCAGCGCTATCGGAGCCCTGTACCGCGACCAGATGGGGGGGCACCACCACGCATTCTTGCGGGAACACGGAGAGGTGATTCTGTCTGCCGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTTAGCGGGATTGGTCCCAGGCCCTATCTCTCTTCATGGGGGATCCCTGTGGTTCATCACCTCCCCTACGTGGGTCACTTCCTCTTCGATAATCCAAGGAACGGAATCACCATTCTCCCCTCCCTTCCACTCGATCATTCTCTCATCCAAGTCGTCGGGATCACCGACTCCGGCGCTTACATCGAGGCCGCATCCAACGTCATCCCTTTCACCTCCCCTCGCCACACCACCTTCGTCCGCTCCCCCCTCTACCTCACCGTGGCCACCATCATTTCCAAGATTTCCGGCCCTCTCTCCGCCGGCTTTCTGAGACTCGCTTCCACCAACGTCGACGCAAATCCCCGAGTGAGGTTCAATTACTTCCACAACCCCCAAGACCTCGAGCGCTGCGTTAACGGGACCAGAAAGATAGCCCAAATCCTCGGGAGCAGGGCCTTGAAGGACTTCAAATTCTCCAACTGGTTGGGAGAGCCAGACTTCAGGTTCATAGGCCCCGCATTGCCGCTTCACCAAACGGACTACCCTCGCATGGCCGATTTCTGCCGCCGGACTGTGAGCACCATCTGGCACTACCACGGCGGTTGTGTGGTTGGCAGGGTAGTTGATCCCAATCTGAAGGTCATCGGAATGGATTCCCTTCGTATTGTCGACGGATCCGTCTTTAGCGTATCGCCTGGAACCAATCCTCAGGCCACCCTCATGATGCTCGGACGGTATTTTGGGTTGAAGATTATCAGAGAAAGGAACGCATCCAAATGA 1665 0.57 VREWKKKQEDISFGHYSRDMEQLESVAFFVFCTTIFASATASPHQGASYLKMVVNATELPPEDYYDYIVVGGGTAGCPLAATLSQSFRVLVLERGGVGTGNPDLINQEGFLSNLLNAENEDSPAQAFISEEGVPNARGRVLGGSSAINAGFYSRAHRDFFVKSGLPWDLALVNHSYRWVEKEIVFRPNLKTWQSAVRDGLLEAGVTPYNGFTLDHAKGTKIGGSTFDSSGTRHTSADLLRHARSSNIKVAVHATVERLLLAGSSAIGALYRDQMGGHHHAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVVHHLPYVGHFLFDNPRNGITILPSLPLDHSLIQVVGITDSGAYIEAASNVIPFTSPRHTTFVRSPLYLTVATIISKISGPLSAGFLRLASTNVDANPRVRFNYFHNPQDLERCVNGTRKIAQILGSRALKDFKFSNWLGEPDFRFIGPALPLHQTDYPRMADFCRRTVSTIWHYHGGCVVGRVVDPNLKVIGMDSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIIRERNASK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02702 554 Gene3D - 185 489 - -
Vimu11g02702 554 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 496 - -
Vimu11g02702 554 SUPERFAMILY FAD/NAD(P)-binding domain 49 352 IPR036188 -
Vimu11g02702 554 PANTHER OSJNBA0019K04.7 PROTEIN 31 551 - -
Vimu11g02702 554 Pfam GMC oxidoreductase 65 334 IPR000172 GO:0016614|GO:0050660
Vimu11g02702 554 ProSitePatterns GMC oxidoreductases signature 2. 293 307 IPR000172 GO:0016614|GO:0050660
Vimu11g02702 554 Pfam GMC oxidoreductase 399 540 IPR007867 GO:0016614
Vimu11g02702 554 PIRSF Alcohol_oxidase 369 554 IPR012132 GO:0050660
Vimu11g02702 554 PIRSF Alcohol_oxidase 43 365 IPR012132 GO:0050660
Vimu11g02702 554 Gene3D - 65 539 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02702 Vimu-Chr11 47528759 47530604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02702 30 550 Miscellaneous Gene Families AT5G51950 46.561 6.47e-153 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02702 K08248 - gmx:100820069 893.649