Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02691 ATGAAGAAGAAGACGGTGGGGCAGCCGAAGTCCGGCGACGGTGACACCGTGCATTCACCGCTTGTCACTTATGCTTCCATGATTTCTCTTCTCACGTTATGTCCTCCGTTTGTCATTCTGCTGTGGTACACCATGACTGCTGCTGACGGATCTGTCTCTGAGACATGGAATTATTTGAAGCAGAATGGGGTACAGGGCTTCCTAGATATATGGCCTAGACCAACTGCTACGGCTTACAAAATCATATTGGTCTATGGTGTATTTGAAGCAGCGCTTCAGCTCCTTCTGCCCGCCAAAACCGTTTACGGCCCTATTTCTCCAACTGGACATCAACCTGTCTACAAGGCAAACGGTGTGGCGGCGTATTTAGTCACCTTGATTACTTATATGGCCCTTTGGTGGTTTGGGATATTCAACCCAACAGTTGTTTATGATCATTTGGGAGAAATATATTCAGCACTCATCTTCGGGAGCTTTGTCTTCTGTATTTTGTTGTACATAAAAGGTCATTTGGCACCATCTTCAACAGATTCTGGTTCATCTGGAAACATAATCATTGATTTTTACTGGGGGATGGAACTCTATCCGCGCATTGGAAAATATTTTGACATAAAAGTTTTCACCAACTGCAGATTTGGAATGATGTCATGGGCAGTTCTTGCATTGACCTACTGTATAAAACAGTATGAAGAAAATGGAAAAGTATCCGACTCAATGCTTGTAAATACTGCATTAATGCTAGTATATGTTACCAAGTTTTTCTGGTGGGAGGCTGGATATTGGAACACAATGGATATTGCACACGATCGAGCTGGATTTTATATTTGCTGGGGTTGCTTGGTGTGGGTTCCATCTGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCCATAAATCTCGGCATTCAGCTAGCGATCTCAATTTTATTGGCTGGCATTCTTTGCATATTCATCAACTATGACTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAAAGCACTGTCTGGGGAAAAGCTCCGTCAAAGATAGAGGCCTCGTATACCACTACTACTGGGGAAACTAAAAGAAGTCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATACTGGCAGCTTTCTTCTGGACAGTCCCAGCTCTTTTTAATCATTTTTTGCCTTACTTCTACGTGATCTTTCTTACCATCCTTCTCTTTGATCGAGCAAAACGAGATGATGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTATATTGCGACAAGGTACCCTACAGAATAATTCCAGGAATATACTGA 1335 0.4255 MKKKTVGQPKSGDGDTVHSPLVTYASMISLLTLCPPFVILLWYTMTAADGSVSETWNYLKQNGVQGFLDIWPRPTATAYKIILVYGVFEAALQLLLPAKTVYGPISPTGHQPVYKANGVAAYLVTLITYMALWWFGIFNPTVVYDHLGEIYSALIFGSFVFCILLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVSDSMLVNTALMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPINLGIQLAISILLAGILCIFINYDCDRQRQEFRRTNGKSTVWGKAPSKIEASYTTTTGETKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDKVPYRIIPGIY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02691 444 ProSitePatterns Sterol reductase family signature 2. 408 431 IPR018083 GO:0016628
Vimu11g02691 444 Gene3D - 234 443 - -
Vimu11g02691 444 Pfam Ergosterol biosynthesis ERG4/ERG24 family 52 444 IPR001171 GO:0016020|GO:0016126|GO:0016628
Vimu11g02691 444 FunFam Putative 7-dehydrocholesterol reductase 234 443 - -
Vimu11g02691 444 ProSitePatterns Sterol reductase family signature 1. 182 197 IPR018083 GO:0016628
Vimu11g02691 444 PANTHER DELTA(14)-STEROL REDUCTASE 17 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02691 Vimu-Chr11 47476652 47480953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02691 14 444 Miscellaneous Gene Families AT1G50430 83.295 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02691 K00213 - gmx:102659420 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02691 11 47476652 47480953 Vimu11g02691 11 47476652 47480953 ECH