Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02683 ATGGATTCAAATTCAAAGAAGTGTAACAAGATCCGTGAGGTGGTTAGGCTTCAACAGATCCTCAAGAAGTGGAAGAAAGCTGCAACATCTTCCTCTGCTTCCAACAGTGCAGACATGGTTCCAAAAGGCTTCCTCGCTGTCTGTGTTGGAACAGAGCTCCAGAGATTCATCATTCCCACCCATTACCTGAGACACCAAGCTTTTGAGATTTTGCTCCAAGAAGCCCAAGATGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCATGTATCAGTCTTCCAGAAAATACTCAAGACCGTGGAGGACAACAACAACAACAGCAAACAACCCTTGCTACATCACTCTGGCTTCCATGGAGACAAGGACAACACTAGTTTTCACGAATCAGATTGTGAAGTTACTCCCCCTCATCATCCTCAAACTTGTACATAG 441 0.449 MDSNSKKCNKIREVVRLQQILKKWKKAATSSSASNSADMVPKGFLAVCVGTELQRFIIPTHYLRHQAFEILLQEAQDEFGFQQEGVLKIPCHVSVFQKILKTVEDNNNNSKQPLLHHSGFHGDKDNTSFHESDCEVTPPHHPQTCT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02683 146 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 99 IPR003676 GO:0009733
Vimu11g02683 146 MobiDBLite consensus disorder prediction 117 137 - -
Vimu11g02683 146 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Vimu11g02683 146 MobiDBLite consensus disorder prediction 110 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02683 Vimu-Chr11 47441924 47442364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02683 5 142 Calmodulin-binding Proteins AT2G24400 44.767 6.53e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02683 K14488 - vra:106773901 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02683 11 47441924 47442364 Vimu11g02683 11 47441924 47442364 ECH