Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02661 ATGAACGCCACAGCGTCGGCAACAGCAGCTAATAGCAGCTTTTACTCACAGACACAGTGCAGACTTTCCTCGGATATTCGAGGATCCATTCCTTTCTCAAAAATGAAACGTTTTCTGTTCTTCAATGACGTTCATCCACGGAATTCTCCGTTGGTTCTAGTCCCCAGGGCTGCTGATCCCAATACAGGCAAGGACAGCAACGTCGGAGACGATGAGGTACAAAAGCAGCAGCGTGTGATGCAACAACCACCCATGTCCCTTAGCCTGGATGACGTCAACCCTGTGGGTCTGGGTCGAAGATCGCGGCAGTTATTCGATGAAGTTTGGAGAAAGTTCTCGGGATTGGGTCAGATTTCTAGGACAATCCGCTCCGATGATCAGGAGGCTCTCGATGCCCTTCTCGTTCGCGAAGGTCCCATGTGCGAGTTCGCAATCCCTGGCGCTCAGAATACTACTGTACTCGTTGTTGGTGCCACTAGCCGCATCGGTCGCATCGTTGTTCGAAAACTCATGCTCAGGGGTTACACCGTAAAGGCTTTGGTAAGGAAGGCAGATCAAGAGGTGGTAGACCTGCTTCCAAGGTCAGTAGAGATAGTTATTGGAGATGTTGGTGATCCCACCACTGTCAAAGCTGCCGTAGAAGGTTGCAACAAAATAATATATTGTGCCACTGCACGCTCTGCTATCACTGGGGATCTCTTCCGGGTTGATCATCGAGGAGTTTATAATCTAACCAAAGCATTTCAGGATCACAATAACAAATTGGCACAATCACGGGCTGGGAAAAGCAGCAAAAGTAAGCTCTTGATTGCCAAATTCAAATCTGAATCTTCATTGCATGGATGGGAAGTTCGTCAAGGAACTTACTTCCAAGATGTACTTGCCACAAAATATGATGGAGGTATGGATGCCAAATTTGAGTTCACCGAGAATGGAGATGCTGTTTTTTCAGGGTATGTATTCAATAGAGGTGGCTACGTGGAACTATCAAAAAAACTTTCCCTACCATTAGGTTATACTCTTGACAGGTATGAGGGTCTGGTTCTCTCTGTTGGTGGCAATGGAAGATCTTATGTGTTGATTGTGGAAGCTGGTCCTTCAGCAGATCCAAGTCAGAGTAGATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTACCATTTTCGTCGTTCCGTCCAGTGAAACCAGATGATCCAGTGTTAGATCCTTTTCTTGTACATACTTTGACAATACGCTTTGAGCCTAGAAGACAGAAGCCTGTTGAAGTAAATGCAACAACGAAACAGGATTTAAGAAGCTTTAAGCTTATATTGGAATATATTAAAGCCCTGCCTACTGGGCAAGAAACTGATTTTGTCTTAGTTTCATGTTCTGGACTAGGAATTGAGCCTTCCAGACGCGACCAGGTTCTTAAAGCCAAGAGGGCTGGTGAAGACTCCCTAAGAAGATCTGGCCTCGGATACACAATAGTTCGTCCTGGTCCATTGCAGGTAAAGTTTCCATTGTTACTCGTAGATATGTACTTGATTTAG 1548 0.4522 MNATASATAANSSFYSQTQCRLSSDIRGSIPFSKMKRFLFFNDVHPRNSPLVLVPRAADPNTGKDSNVGDDEVQKQQRVMQQPPMSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRSDDQEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKADQEVVDLLPRSVEIVIGDVGDPTTVKAAVEGCNKIIYCATARSAITGDLFRVDHRGVYNLTKAFQDHNNKLAQSRAGKSSKSKLLIAKFKSESSLHGWEVRQGTYFQDVLATKYDGGMDAKFEFTENGDAVFSGYVFNRGGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLIVEAGPSADPSQSRLYFARISTKVGFCRVRVPFSSFRPVKPDDPVLDPFLVHTLTIRFEPRRQKPVEVNATTKQDLRSFKLILEYIKALPTGQETDFVLVSCSGLGIEPSRRDQVLKAKRAGEDSLRRSGLGYTIVRPGPLQVKFPLLLVDMYLI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02661 515 SUPERFAMILY Galactose-binding domain-like 269 414 IPR008979 -
Vimu11g02661 515 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 500 IPR036291 -
Vimu11g02661 515 Gene3D - 409 508 - -
Vimu11g02661 515 Gene3D - 148 280 - -
Vimu11g02661 515 Pfam NAD(P)H-binding 157 253 IPR016040 -
Vimu11g02661 515 PANTHER FLAVIN REDUCTASE-RELATED 149 502 - -
Vimu11g02661 515 Pfam Complex I intermediate-associated protein 30 (CIA30) 301 400 IPR013857 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02661 - - gmx:100779812 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02661 11 47269901 47288364 Vimu11g02661 11 47269901 47288364 ECH