Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02608 ATGTTAAGTGATTACGTGGCAGGTGTTCATCTTGTTCGAATAGATGGAGCAAAGGATCTCCACGTTCGTCCCATGGTGGTGGTTGGAGGGGAGCCATCCACAAGCCCCACATTGTCAAAAACCATCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTTCTATGCCTGTCTGGTTCACAATCAAGAAGCCATTCATTCCCCAAAAGAAACCCTCCCCAGCAGGTATGGTTACCTACCAATCAATCCTACTTCTGCGTCTGCAATTTTCTACGCTTTCTATGAAGCCCAAAACTCCACTTTTCCAGTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGCCAACTTGTACGAGCTTGGACCATGGCGAGTCACCCAATCCCTCACCCTCCAACCCAACCCTGGTTCCTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAATCCCATTGGATCTGGTTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAGAGATCAAAACGCGGTTGCCAAACACCTCTTTGCTGCTATAACCAACTTTCTTCAACTGGATCCTCTTTTCAAGCATCGCCCTATTTATATCACTGGAGAAAGCTATGATGGCAATGTGCCTGCACTTGGAGTGAATCTGGCTGGTGTAGCTATTGGGGATGGGTTAACAGACCCCAAAACTCAAGTTCTCTCTCATGCTGTGAATGCTTACTATGTTGGATTGATCAACGAGAGGCAGAAGAATGAGTTGGAAAAAGGTCAACTAGAAGCTGTGTTGGTTCTATCAAGGAGGAGGTTCACCGGGGAGATACAAACACTAATGAGATATGAGCCCAACCATATAAAGGATTGA 873 0.4639 MLSDYVAGVHLVRIDGAKDLHVRPMVVVGGEPSTSPTLSKTIFSSSSSSSSSYFYACLVHNQEAIHSPKETLPSRYGYLPINPTSASAIFYAFYEAQNSTFPVSQTPLLIWLQGGPGCSSMLANLYELGPWRVTQSLTLQPNPGSWNRIFGLLFLDNPIGSGFSVASTPEEIPRDQNAVAKHLFAAITNFLQLDPLFKHRPIYITGESYDGNVPALGVNLAGVAIGDGLTDPKTQVLSHAVNAYYVGLINERQKNELEKGQLEAVLVLSRRRFTGEIQTLMRYEPNHIKD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02608 290 SUPERFAMILY alpha/beta-Hydrolases 71 261 IPR029058 -
Vimu11g02608 290 Gene3D alpha/beta hydrolase 54 265 IPR029058 -
Vimu11g02608 290 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 165 IPR001563 GO:0004185|GO:0006508
Vimu11g02608 290 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 154 IPR001563 GO:0004185|GO:0006508
Vimu11g02608 290 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Vimu11g02608 290 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 259 IPR001563 GO:0004185|GO:0006508
Vimu11g02608 290 Pfam Serine carboxypeptidase 73 260 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02608 Vimu-Chr11 46323305 46325683 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02608 K09645 - gmx:102663282 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02608 11 46323305 46325683 Vimu11g02608 11 46323305 46325683 ECH