Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02547 ATGCCTTCCTCTGATCATCGCCGCCTGCGACACGCGGTGGTGGCATGTATTGTAATAGCGTTGTTGGGCTGCGAAGTGGGAGAGGCTTTGAAGGTGCCGTTTAGAGTCAACGATGTGCTTCCCGTGTTGCCACGCCAGATTTCGTGGCCAGTTCTGAACAATCTCCACAGTGCTGTTGACTTGCTTCCTTATTTCGTTGGCTCCCTCACTCCCTCCAATGCCTCCATCAAGTGGAAAGGGGCTTGCTTTTATGACAACACCGCCAAGATTGAACTTAGCCCCGCTTCTCAGGGTGCTGTTCTCTTCGTCAAGACAGAGGCTGCACATAGCTGGACCTGCATGGATCTGTATGTTTTTGCAACCCCTTACAGGATTACGTGGGACTACTACTTCTCTTCACGGGAACATACGTTGAAGTTTGATTCCTGGGAAGAGCCTGCAGAATTGGAATATGTAATGTTGATTTTAGTTTTGTTGTTATTAGCTCTCAATGCTGTTCGAAGTGTTGTAGCTGTTAAGCAGCATGGGGTTTCTGTGTTTCTCATGCCATCTGGGATGCTGGGAACACTGCTTTCTCTGATTGACGTTTTGCCTTTGTTCTCAAACACTGGTTGGGGTCAGAATGCCAACCTGGAGTTCCTGAAGAAGCACATGGGAGCTACGTTTGAGAAACGCAACCAGCCTTGGCGTGCATATATAGACCCTGCTGATGTTCATTCTGGAGACTTCTTAGCGGTGTCAAAGATCCGGGGTAGGTGGGGAGGTTTTGAGACGTTAGAAAAGTGGGTGACTGGTTCATTTGCTGGTCATACTGCAGTTTGCTTGAAGGATGAATCGGGGAATTTATGGGTTGGTGAATCAGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCTTGGGAAGAATGGTGGGAATTGGCTCTAAAAGATAATTCCAATCCACAGATAGTCTTGCTTCCCCTACATCCAGAAATACGTGCAAAATTTAACAACACTGCTGCATGGGGGTATGCCCGCAGCATGTCTGGCAAGCCTTATGGTTATCACAATATGATATTCAGTTGGATTGACACTGTAGCAGACAACTATCCTCCTCCTCTCGATGCTCACTTGGTAGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCATATTCTGCTAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTGCATGATATTATACTTGAGACTGAGAAGCGTGGGATACCTTTCGATGAACTACTAACTATTCCTGAACAAGATGAATGGGAATACAGTGATGGGAAGTCAACAACTTGTGTTGCATTTATCCTATCAATGTATAAAGAAGCTGGAGTTTTTGGTCCCATTTCTAGTTCCATTCAAGTAACTGAGTTCACAATTCGTGATGCATACATGCTCAGAATTTTCGAGGACAACCAAACACGCCTACCAAGATGGTGCAACAATGAGAATGACCAGCTTCCATTCTGCCAGATTCTTGGTGAATATAGGATGGAACTGCCTGGCTACAACACCTTGGATCCATATGCCAACATGAATGAGTACTGTCCTTCTCTTCCTCCAATTTATGATAGGCCTTCTCGATGTTAG 1632 0.4528 MPSSDHRRLRHAVVACIVIALLGCEVGEALKVPFRVNDVLPVLPRQISWPVLNNLHSAVDLLPYFVGSLTPSNASIKWKGACFYDNTAKIELSPASQGAVLFVKTEAAHSWTCMDLYVFATPYRITWDYYFSSREHTLKFDSWEEPAELEYVMLILVLLLLALNAVRSVVAVKQHGVSVFLMPSGMLGTLLSLIDVLPLFSNTGWGQNANLEFLKKHMGATFEKRNQPWRAYIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGSFAGHTAVCLKDESGNLWVGESGHENEKGEEIIVVIPWEEWWELALKDNSNPQIVLLPLHPEIRAKFNNTAAWGYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVVISVMSMWTRLQPAYSANMWNEALNKRLGTEGLDLHDIILETEKRGIPFDELLTIPEQDEWEYSDGKSTTCVAFILSMYKEAGVFGPISSSIQVTEFTIRDAYMLRIFEDNQTRLPRWCNNENDQLPFCQILGEYRMELPGYNTLDPYANMNEYCPSLPPIYDRPSRC 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02547 543 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vimu11g02547 543 PANTHER OS01G0793500 PROTEIN 16 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02547 Vimu-Chr11 45027993 45032161 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02547 - - gmx:100815535 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02547 11 45027993 45032161 Vimu11g02547 11 45027993 45032161 ECH