Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02425 ATGAACAGGGACAGCTCAATCGCATGTCTGAGCCGATGTTCGAGGTCCGATTATGGTTCTCTGGCCTCACTGAATAAGAGCTTTCGAAACACAATCAGAAGCGGGGAGCTGTACAGATGGAGGAGGCTGAAAGGCATAGTGGAATGGGAGGCCTACGATCCAATTCGTGAAAGGTGGATGCATTTGCCAAGAATGGCTTCGAACGAATGCTTCATGTGTTCGGACAAGGAGTCTCTGGCAGTAGGTACCGAGCTTATTGTGTTTGGGAGGGAGCTGAGGTCTCACGTGATATACAGATACAGTCTTTTGACGAACTCATGGTCATCTGGGATGAGGATGAATGGTCCAAGGTGTTTGTTTGGATCTGCGAGCCTAGGGGAGATAGCTATTTTGGCGGGTGGGTGTGATTCCGAGGGTCGTATTCTTGACTCGGCCGAACTGTACAACTCTGAGAATCAAAGCTGGGAAGTTCTCCCTAGCATGAACAAGCCAAGGAAGATGTGCTCTGGGGTATTTATGGATAGAAAATTTTATGTTATTGGGGGAATTGGTGGAAAAGATTCTAAGCTTCTTACATGTGGTGAGGAATACAACTTACAAACTAGAACATGGACAGAAATTCCTATTGTAAATAATGAACTTTACGCTGCCGATTATGCTGACATGGAGGTGAAAAAATACGATAAAGATAGAAGACTTTGGCGTAGCATTGGGAGGCTGCCTGAACGAGTGGTGTCGATGAATGGTTGGGGTCTTGCATTCAGGGCATGTGGTGATAAGCTAATTGTGATTGGTGGTCCAAGGACTCACGGTGAAGGTTTTATCGAACTAAATTCGTGTGTTCCTGGTGAAGGACCTCTACAGTGGAATCTACTTGCCAGAAAACACTCCGGCAACTTTGTCTATAATTGTGCTGTCATGGGATGCTGA 930 0.4602 MNRDSSIACLSRCSRSDYGSLASLNKSFRNTIRSGELYRWRRLKGIVEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELIVFGRELRSHVIYRYSLLTNSWSSGMRMNGPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQSWEVLPSMNKPRKMCSGVFMDRKFYVIGGIGGKDSKLLTCGEEYNLQTRTWTEIPIVNNELYAADYADMEVKKYDKDRRLWRSIGRLPERVVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSCVPGEGPLQWNLLARKHSGNFVYNCAVMGC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02425 309 FunFam F-box/kelch-repeat protein SKIP11 38 294 - -
Vimu11g02425 309 Pfam Kelch motif 164 208 IPR006652 GO:0005515
Vimu11g02425 309 Pfam Kelch motif 116 162 IPR006652 GO:0005515
Vimu11g02425 309 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 2 309 - -
Vimu11g02425 309 SMART kelc_smart 84 127 IPR006652 GO:0005515
Vimu11g02425 309 SMART kelc_smart 128 175 IPR006652 GO:0005515
Vimu11g02425 309 SUPERFAMILY Kelch motif 46 275 IPR015915 GO:0005515
Vimu11g02425 309 Gene3D - 39 281 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02425 Vimu-Chr11 42345080 42346111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02425 - - var:108320158 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02425 11 42345080 42346111 Vimu11g02425 11 42345080 42346111 ECH