Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02332 ATGGGGTCCAAAGGGTCCATCTCCATGAAGCTTTTGCTGCTTCTGCATTTGGCCATTCTCTGTTCTTCACAGGATTTTGATTTCTACTACTTCGTTCAGCAGTGGCCAGGCTCCTACTGTGACACACAGAACAGTTGCTGCTACCCGACCACTGGGAAACCCGCTGCAGATTTTGGCATTCATGGACTCTGGCCTAATAACAAAGATGGTTCTTACCCGTCTAACTGTGATTCAAACAATCGTTTTCAGCAATCACAGATATCAGATTTGACAAGCAGTTTGCAGAGGAATTGGCCGACTCTAGCATGCCCAAGTGGTAGTGGTGTTCAATTCTGGGGTCACGAATGGGAGAAACATGGAACTTGCTCTGAGTCACTCCTTAAGCAACATGACTATTTTGAAGCAGCTCTGGATCTGAAGCAGAGAGCCAACCTCCTCCGAGCTCTTGCAAATGCTGGGATAGAAGCAGATGGAGGGTTTTACAGTCTTAGCAGCATCAAAGGGGCTATAAAAGAAGCAATTGGGTATACTCCATACGTTGAGTGCAATCTGGATGCGTCACGTAACAGCCAGCTTTACCAACCTCTAGTTTCATCGAATGCCCTGTCTTTCCTAAAGGCAGTTGTGGCTCCCAAATTCAGTTCCCAACTTTCTAACACTTGTTTCTAG 669 0.4634 MGSKGSISMKLLLLLHLAILCSSQDFDFYYFVQQWPGSYCDTQNSCCYPTTGKPAADFGIHGLWPNNKDGSYPSNCDSNNRFQQSQISDLTSSLQRNWPTLACPSGSGVQFWGHEWEKHGTCSESLLKQHDYFEAALDLKQRANLLRALANAGIEADGGFYSLSSIKGAIKEAIGYTPYVECNLDASRNSQLYQPLVSSNALSFLKAVVAPKFSSQLSNTCF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02332 222 Gene3D - 20 216 IPR036430 GO:0003723|GO:0033897
Vimu11g02332 222 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Vimu11g02332 222 PANTHER RIBONUCLEASE T2 22 194 IPR001568 GO:0003723|GO:0033897
Vimu11g02332 222 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Vimu11g02332 222 Pfam Ribonuclease T2 family 26 194 IPR001568 GO:0003723|GO:0033897
Vimu11g02332 222 SUPERFAMILY Ribonuclease Rh-like 20 194 IPR036430 GO:0003723|GO:0033897
Vimu11g02332 222 FunFam Ribonuclease 3 20 219 - -
Vimu11g02332 222 CDD RNase_T2_euk 26 194 IPR033697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02332 Vimu-Chr11 40438012 40439013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02332 K01166 - gmx:100305644 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02332 11 40438012 40439013 Vimu11g02332 11 40438012 40439013 ECH