Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02325 ATGTATGACCATGGTAAAAGAAGAGAAGGAGAAATAGAGGGGTCTGTTTCCATGGAGAGCGTCTCGTGTGTTCATGAAGATGTTAAGAAATTAAATGAAAATGAAACAGAAAGATCTGTTTCCACGGGGGCAGATTCCAATTTACTTCGAGAAGACGAAGAAGAACATTCTTTCTTCACAAATTTTGAAGCCAATGATTCGGAAGAAGAACCAAGTATGCTAACCTTCAGTTTCCGTCAAAATTATATAGCTCCGAATGTTTCCCATAATCTATTTTCCATTAATGAAAGTATTTCAAAAGTTGAATCTTTAGAGCAATATTTGGAGGAAGGCCTTGTTTCTCAAGAAGAACAAAGAAACATCCCATCCATTTTCACTTCTGATCCAATATCTCAATGTAAAGCGTTTTGTTCAAGTGATTCATTTGATAATGACATTCTAAACGACAGCACATTTCAATCTGATTCTGGGTCAGAATCATACAGCAACAACAACAACAATGACTATTCGGTAACACTTGAAGTTCTTAGTTCTAGCCCTTTTTGTGAAGGATATGGTACTGAGAGCCATGAGGAAAATACTGATGAGTTTCGTGAAGAATCTCAATATTCACGTGACAATGAAGTCTCAGGCGATCACAATTTTGATCTTGTTGAGGACAAAAATGAAAAGGAAAGTTCTTCATACATTGGAGAAGACAGCATGTGGGAAGATAAATGGGATGAATCAGATTTTGACGACGAAGAAGAAGATGACGATGACGATGACTTTGAATGGGAGAATGATGAAGTAGTGCAACAGTTGAAAATGGAACTTAAAAATGCAAGACAAGGAGGGCTTTCCACTATTTTAGAAGAGGAAGAAGAAGCAGAGTCTCCAAAAGTTGTTGAGGATCTAAAGCCACTGAAGATAGAAAAGAAGATAGAATTCAAAGATCACATTGTTGAAATTCAAAAGGTTTATAGGTGCTATGCAGAGAAAACTCGGAAACTGGATGTTTTGAATTACCAGACCATGCATGCAATTGTTTGCCTCTCCTGGGAAATTTTGTGTTGGCAGTTCAAGAAAGTTAAAGAGTTACAACAGTATGATTCTCAATGGCCTCGCAGCTATAATCTTGTGGCGGCTGAATTTCAACGCTTTCATGTCCTCATGCAACGCTTTTTGGAAGATGAACCATATCAAGGTCCAAGAATTCAAAACTACAACAACAACCGTTGCGTCATTCGTAACCTGCTGCAAGTTCCACCCATTAAAGATGACAATACGAAAGACAAGAAAATAATCAAGTTGGGTGAAGAGTATGCAATCAATAGCGAAAGGTTGGCAAAAATCATCAAAGAGTCGATGCGGGTGTTCTGGGAATTTGTGAGAGCAGATAAAGATTATGGCAGTGTGATCAAAGCTTCTCATAAAACAGAAATTGATCTCAAGGACGTAGCAGCCTCTGAAATTCTTGGGAATGTTCGAACTCAATTGCAAAAGAAGGAGAGAAAGCTAAAAGACATAGTAAGGAGTGGGAATTGCATAGTGAGAAAGTTCCAAAAACAGAATGAAGATCATATTCAACTTGATCAAGAACAGTTGCTTGCTCAAGTGGGATTGAGATTGGTGTCAAGGGTTTTGCACATGAAAAAGTTGAGAAAAGATCAACTAATGTGGTGTAATGAAAAGTTGAACCGAATCAATTTTGTTGGCAGAAAGGTTCAAGTGGAGCCTTCTCTTTTGTTTTTTCCTTGTTGA 1743 0.3775 MYDHGKRREGEIEGSVSMESVSCVHEDVKKLNENETERSVSTGADSNLLREDEEEHSFFTNFEANDSEEEPSMLTFSFRQNYIAPNVSHNLFSINESISKVESLEQYLEEGLVSQEEQRNIPSIFTSDPISQCKAFCSSDSFDNDILNDSTFQSDSGSESYSNNNNNDYSVTLEVLSSSPFCEGYGTESHEENTDEFREESQYSRDNEVSGDHNFDLVEDKNEKESSSYIGEDSMWEDKWDESDFDDEEEDDDDDDFEWENDEVVQQLKMELKNARQGGLSTILEEEEEAESPKVVEDLKPLKIEKKIEFKDHIVEIQKVYRCYAEKTRKLDVLNYQTMHAIVCLSWEILCWQFKKVKELQQYDSQWPRSYNLVAAEFQRFHVLMQRFLEDEPYQGPRIQNYNNNRCVIRNLLQVPPIKDDNTKDKKIIKLGEEYAINSERLAKIIKESMRVFWEFVRADKDYGSVIKASHKTEIDLKDVAASEILGNVRTQLQKKERKLKDIVRSGNCIVRKFQKQNEDHIQLDQEQLLAQVGLRLVSRVLHMKKLRKDQLMWCNEKLNRINFVGRKVQVEPSLLFFPC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02325 580 MobiDBLite consensus disorder prediction 237 255 - -
Vimu11g02325 580 MobiDBLite consensus disorder prediction 27 50 - -
Vimu11g02325 580 MobiDBLite consensus disorder prediction 182 255 - -
Vimu11g02325 580 MobiDBLite consensus disorder prediction 188 236 - -
Vimu11g02325 580 PANTHER OS09G0413600 PROTEIN 343 580 - -
Vimu11g02325 580 Pfam Protein of unknown function (DUF1666) 342 579 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02325 Vimu-Chr11 40245432 40249187 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02325 - - gmx:100820215 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02325 11 40245432 40249187 Vimu11g02325 11 40245432 40249187 ECH