Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02320 ATGGCCTATTCTCAGGCGATGGGAGGTGCCTTGGGAATGGCAAACAGTTTCATTGACTTCTCTTGCTTGTGGATATGGGGCAGTTTTGTGTTGACAGGTTTGACTGAAGCGGTTGCTCTCCCTTATCTTGGGATCAAACCTGATGTGCTAAGTTTAGAAGACAAGGCAGAGATACTTTTGTTGGATCAGGGTATGACCACTGCTGTTGTACTTGGAATAATTTATAGTGTTGCCAACAGTTTCCAGCCACTTCCTGAAGACTTCTTCAAATACGATTTGAGGGAGCCTTTCAATCTTCAGAAGGGTTGGCTTTTATGGGCTGGAGTTGGACTTGTTGGTTCCATAATTGCCACTGCATTGACCGGAGTTGCTGTGTCTTCCTTCAGTGGAGAAACCCCACAAAGAGAGACTGATGCTCTTGTTCGTTTGCTTCCGTTAATTGGATCATCAAATCTCAATACTGTGTGCTTGCTGGGCATCACAGGTGTTCTTGCTCCACTCCTTGAGGAGACTGTATTTCGAGGATTTTTTATGACTTCTCTGACTAAGTGGGTTCCTACACCGGTTGCTGTTATCATTAGCGCCACTGTGTTTGCCCTTGCACATCTCACTCCAGGAGAATTTCCACAGCTGTTTGTTCTCGGGACTGCTTTGGGGTTTTCATATGCTCAAACTCACAACCTTCTCAATCCCATCACTATTCATGCTTTTTGGAACTCAGGAGTGATATTATTTCTTACTTTTCTGCAGCTTCAAGGGTACGATATCAGAGAATTGTTGCAGGTAACTTGA 792 0.4444 MAYSQAMGGALGMANSFIDFSCLWIWGSFVLTGLTEAVALPYLGIKPDVLSLEDKAEILLLDQGMTTAVVLGIIYSVANSFQPLPEDFFKYDLREPFNLQKGWLLWAGVGLVGSIIATALTGVAVSSFSGETPQRETDALVRLLPLIGSSNLNTVCLLGITGVLAPLLEETVFRGFFMTSLTKWVPTPVAVIISATVFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLNPITIHAFWNSGVILFLTFLQLQGYDIRELLQVT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02320 263 Pfam Type II CAAX prenyl endopeptidase Rce1-like 155 239 IPR003675 GO:0004222|GO:0016020|GO:0071586
Vimu11g02320 263 PANTHER CAAX AMINO TERMINAL PROTEASE 23 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02320 Vimu-Chr11 40129004 40136840 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02320 K07052 - gmx:100816434 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02320 11 40129004 40136840 Vimu11g02320 11 40129004 40136840 ECH