Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02172 ATGAGCCAAAGTATCTTCCACCAAACGGTGCTTTGCCAAACGCAAACCGTTGCGGAACATCAAAGTAAGGTACGTTCCTTCCCGGTTAGTGTGAACAGAGTAAAGAAGAATCTCGCGCTTCGTACAAATTTTCGCGGGAACAGGCTGTGTGTGAGGAAATGCAAATTAGCCATGGGAAAGCACCGCCACGTCGACGCTATTCCACGCGCTGTGTTAACCACGAATCCGGCTTCTGAGAATTTGAGTGTTGTGTTGACTGCCTTTTTGGCCATTGAACAGCTTTCTGGGAGGTTCAACCTTGATGGAAATATTGACTTGCAGGTTAGTGTTAGTTCTTCACAACCAGGAGCTGCAACACAAGTAGATATTAAAGTTTCATATAGTAGTGGCTCTCTGCTTTTACATTGGGGAGTTGTGTGTGATCAGCCAGGGAAATGGGTACTTCCTTCTCGTCGCCCGGAAGGAACTAAAGTTTACAAGAACAAAGCTCTTAGAACTCCTTTCTTGAAAGCCGACTCGGAATCCTTCCTTAAAATAGAAATTTACGATCCTGCAGCACAATCCATTGAGTTCCTCATACTTGATGAGGCCAAAAATAAGTGGTTTAAAAATAATGGTGAGAACTTTCACATTAAGTTACCAGTAAAAAATAAGCTATCTCAAGAAGTTTCAGTTCCTGAAGACCTTGTACAGATTCAAGCATATCTTAGGTGGGAACGAAAGGGTAAGCAGATGTACACTCCAGAGCAAGAGAAGGCGGAATATGAAGCAGCTCGGCAAGAACTATTGGAGGAAGTATCCAGGGGTACTTCTGTACAAGATCTTCGTGCAAGGTTAACTAAGAATACTAAAGCTGCTGAAGTGAAGGAGCCTTCTGTTTCTGAAACAAAGACTATCCCTGATGAACTTGTACAAATTCAAGCTTATATTCGATGGGAAAAAGCTGGGAAGCCCAACTACTCTCAGGAACAACAACTTATAGAATTTGAGGAAGCAAGAAAAGAGTTGTCAGCAGAGCTTGAGAAGGGTGCTTCTTTGGATGAGATACGAAAGAAAATTATCAAAGGAGAAGTACAAACTCAAGTTGCCAAGCAATTGAAAACAAAAAAATACTTCCGTGCTGAAAGAATACAGAGGAAAAAGAGAGATTTGTGGCAGATTATCAACCAACTTGTTGATGAAAATATAGTTGAACAATTTAAAGATGTTCCAAAGTATGCCGAGGCAAGGGAAGAATATGGAAGTGTTCCTGTTTTGAACAAGAAAATATACAAGCTTGATGATAATTATCTTTTGGTTCTCATTACCAAAGATGCTGGTAAGATTAAGGTTCACCTGGCTACAGACTCAAAGAAACCTCTTACACTTCACTGGGCCTTATCTAGAACATCTGAAGAGTGGTTGTTACCACCTGGAAATGCTCTGCCCCCTGGATCTGTTGCTCTGACTGAGGCTGCTGAAACACCTTTCAAAGCTGGTTCTTTGTCTCATCCTTCCTTTGAGGTCCAGTCCTTGGATATAGAGGTTGACGATGATACTTTTAGAGGAATACCATTTGTCATTTTATCGGAAGGAAACTGGATAAAGAACAATGGATCAAATTTTTATATTGAATTTACCGAAAAAAAGCAGATACGAAAGGATTTTGGTGATGGCAAAGGTACAGCCAAGTTCTTGTTGGATAAAATAGCAGAAAAGGAAAGTGAGGCACAAAAGTCCTTCATGCATCGGTCACAAACCTTATTTTCTGTTACTATTGTGGCAAAGCATGTGGCTTATAGACTGGCGAAGGATGAAGCCAGGAGTGCCGGTCGACTGGGTCTTGCGGGAATTTTGGTGTGGATGAGATTCATGGCTACAAGGCAGCTCATATGGAACAAAAATTACAATGTGAAACCACGTGAGATAAGTAAAGCACAGGATAGGCTTACAGACTTGCTCCAGGATGTTTATACAAGTTATCCACAGTATAGAGAAATTGTGAGGATGATCTTGTCTACTGTTGGTCGTGGAGGTGAAGGAGATGTTGGACAAAGGATTCGGGATGAAATACTTGTTATTCAGAGAAATAATGATTGCAAAGGTGGAATGATGGAGGAATGGCACCAGAAGTTACACAATAATACTAGCCCTGATGATGTTGTGATCTGTCAGGCGCTAATTGATTATATAAATAGTGACTTTGATATTGGTGTTTACTGGAAAACATTGAATGACAACGGAATAACAAAAGAACGGCTTCTGAGCTATGATCGAGCCATTCATTCTGAACCAAATTTTAGGAGAGATCAGAAGGAAGGTCTTCTGCGGGATCTGGGAAACTACATGAGGACTTTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCTATTGCAAATTGTATGGGCTACAAATCTGAGGGTCAGGGCTTCATGGTTGGGGTGCAGATAAATCCAGTTCCGGGTTTGCCTGCTAGTTTTCCAGGATTACTAGAGTTTGTCATGGAGCACGTTGAAGATAAGAATGTTGAACCACTTCTTGAGGGATTGCTTGAGGCTCGTCAGGAACTCCAACCATCACTTAGTAAATCCCAAAGTCGTCTGAAAGATCTTATATTTTTGGATGTTGCTCTTGATTCTACCGTTAGAACAGCAGTGGAAAGGGGTTATGAGGAATTAAACAATGCTGCACCTGAGAAAATAATGTACTTCATCTCCTTGGTTCTTGAAAATCTTGCACTTTCATCGGATGACAATGAAGATCTTATCTACTGTTTGAAGGGATGGGATCTTGCCTTAAGCATGTGCAAGAGTAATGACACTCATTGGGCATTGTATGCTAAATCAGTCCTTGACAGAACCCGCCTTGCACTCACAAACAAGGCTCAATTATACCAGGAAATTCTGCAACCATCGGCAGAATACCTTGGATCACTGCTTGGTGTGGACCAATGGGCTGTGGAAATATTTACTGAAGAAATTATCCGTGCTGGATCTGCTGCCTCTTTGTCTACTCTTCTAAATCGACTGGATCCTGTGCTCCGAAAGACAGCTAATCTTGGAAGCTGGCAAGTTATTAGCCCAGTTGAAACTGTTGGATATGTTGAGGTTGTAAATGAGTTGCTTGCTGTTCAAAACAAATCATATGAGCGACCAACAATTTTGATAGCCAAGAGTGTAAAAGGAGAGGAAGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCAGATATGCCTGATGTCTTATCTCATGTTTCTGTTCGAGCAAGAAACAGCAAGCATACTCCAACAACTGTATTTATATTGAAAACTACTTACCTTCGTTCAGCTGATTCGAAATTTGATTCTCTCATTAAATTCAACATCCAATCATTCAGAGACGGTGATATTGTTAGCTGGGAAATTCAAGGACAGTTGGATCAAAAGCCCAGGATTTGGAAGGTTTGTTTCGCTACATGCTTTGATCCCAATATCCTTGCTAACCTCCAAGAAAATAAAGGAAAGCTTTTGCGCTTAAAGCCTACATCTGCTGATGTTGTTTATAGTCAGGTCAAGGAGGGGGAGTTTACTGATGACCAATCAACTCACCTGAAAGATATCGGTTCAGTGTCACCCATATCTCTGGCGAGAAAGAAGTTTAGTGGTAGATATGCTATCTCATCCGAAGAATTCACTGGAGAAATGGTTAGGTTTCAAAATGACGTACATGTGTCGGTTGGAGCTAAATCTCGTAATATTGCTTATTTAAAAGGGAAAGTAGCTTCTTGGATTGGAATTCCTACCTCAGTTGCCATACCCTTTGGAGTTTTTGAACATGTTCTTTCTGATAAATCAAATCAGGCAGTGGCTGAGAGGGTCAATATTTTGAAAAAGAAGCTAATTGAGGGGGACTTCAGTGTTCTCAAGGAGATTCGCGAAACAGTTTTACAGTTGAATGCACCACCCCAGTTGGTTGAAGAGCTGAAAACTAAAATGAAGAGTTCTGGAATGCCTTGGCCGGGTGATGAAGGTGAACAGCGATGGGAACAAGCTTGGAAGGCTATAAAAAAGGTGTGGGGCTCCAAGTGGAATGAAAGGGCATACTTCAGCACACGAAAAGTTAAATTGGACCATGAGTATCTTTCCATGGCTGTCCTTGTTCAGGAAGTGGTAAATGCTGATTATGCTTTTGTCATCCACACGACTAATCCGTCCTCTGGGGATTCGTCAGAGATATATGCTGAGGTGGTAAAGGGACTTGGAGAAACACTTGTTGGAGCTTATCCAGGTCGTGCTTTGAGTTTTGTCTGCAAAAAGAGTGATTTGAACTCTCCTCAGATCATGGGTTATCCTAGCAAACCTGTTGGCCTATTTATAAGACGGTCAATTATTTTTCGATCTGATTCCAATGGTGAAGACCTAGAAGGTTATGCTGGTGCAGGTCTTTATGACAGTGTGCCAATGGATGAAGAGGAGACAGTGGTGCTTGATTACTCATCAGACCAACTGATCCTTGATGGAAATTTTCGCCAGTCAATCTTGTCAAGCATCGCTCGTGCAGGAAATGAAATTGAAGGGTTATATGGCTCTCCTCAGGACATTGAAGGTGTCATCAAGGATGGAAAACTCTATGTTGTCCAGACCAGACCACAAATGTAG 4620 0.416 MSQSIFHQTVLCQTQTVAEHQSKVRSFPVSVNRVKKNLALRTNFRGNRLCVRKCKLAMGKHRHVDAIPRAVLTTNPASENLSVVLTAFLAIEQLSGRFNLDGNIDLQVSVSSSQPGAATQVDIKVSYSSGSLLLHWGVVCDQPGKWVLPSRRPEGTKVYKNKALRTPFLKADSESFLKIEIYDPAAQSIEFLILDEAKNKWFKNNGENFHIKLPVKNKLSQEVSVPEDLVQIQAYLRWERKGKQMYTPEQEKAEYEAARQELLEEVSRGTSVQDLRARLTKNTKAAEVKEPSVSETKTIPDELVQIQAYIRWEKAGKPNYSQEQQLIEFEEARKELSAELEKGASLDEIRKKIIKGEVQTQVAKQLKTKKYFRAERIQRKKRDLWQIINQLVDENIVEQFKDVPKYAEAREEYGSVPVLNKKIYKLDDNYLLVLITKDAGKIKVHLATDSKKPLTLHWALSRTSEEWLLPPGNALPPGSVALTEAAETPFKAGSLSHPSFEVQSLDIEVDDDTFRGIPFVILSEGNWIKNNGSNFYIEFTEKKQIRKDFGDGKGTAKFLLDKIAEKESEAQKSFMHRSQTLFSVTIVAKHVAYRLAKDEARSAGRLGLAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQDVYTSYPQYREIVRMILSTVGRGGEGDVGQRIRDEILVIQRNNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYINSDFDIGVYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKEGLLRDLGNYMRTLKAVHSGADLESAIANCMGYKSEGQGFMVGVQINPVPGLPASFPGLLEFVMEHVEDKNVEPLLEGLLEARQELQPSLSKSQSRLKDLIFLDVALDSTVRTAVERGYEELNNAAPEKIMYFISLVLENLALSSDDNEDLIYCLKGWDLALSMCKSNDTHWALYAKSVLDRTRLALTNKAQLYQEILQPSAEYLGSLLGVDQWAVEIFTEEIIRAGSAASLSTLLNRLDPVLRKTANLGSWQVISPVETVGYVEVVNELLAVQNKSYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKHTPTTVFILKTTYLRSADSKFDSLIKFNIQSFRDGDIVSWEIQGQLDQKPRIWKVCFATCFDPNILANLQENKGKLLRLKPTSADVVYSQVKEGEFTDDQSTHLKDIGSVSPISLARKKFSGRYAISSEEFTGEMVRFQNDVHVSVGAKSRNIAYLKGKVASWIGIPTSVAIPFGVFEHVLSDKSNQAVAERVNILKKKLIEGDFSVLKEIRETVLQLNAPPQLVEELKTKMKSSGMPWPGDEGEQRWEQAWKAIKKVWGSKWNERAYFSTRKVKLDHEYLSMAVLVQEVVNADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKSDLNSPQIMGYPSKPVGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEETVVLDYSSDQLILDGNFRQSILSSIARAGNEIEGLYGSPQDIEGVIKDGKLYVVQTRPQM 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02172 1539 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1232 1538 - -
Vimu11g02172 1539 Gene3D - 1379 1538 - -
Vimu11g02172 1539 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 1138 1539 - -
Vimu11g02172 1539 Gene3D - 1222 1378 IPR013815 GO:0005524
Vimu11g02172 1539 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1336 1538 IPR002192 GO:0005524|GO:0016301|GO:0016310
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02172 130 227 Glycoside Hydrolase AT1G69830 33.019 7.93e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02172 K08244 - gmx:100802675 2511.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02172 11 37755356 37771812 Vimu11g02172 11 37755356 37771812 ECH