Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02171 AGAGAGGCAGTGATGGAGACAGCAATGATGCACTTTCTTTACTATTTGTTCTTAGCAGTTTGTTGGTGCAGTGGTAACATACTGCAGGCTATTGAATTACCCAACTACACGCTCATACTCTCTCAATCAGATTTTCAGATTAGACTCTACAATGAATCCACATGGGTATCAGCCCGTGTCTCTGGAACTTCCTTTGACCAGTCCTACAGAAATGGATTTCAAAGGTTGTACCAGTATATCCATGGCGCGAACTCGAATTCTTCAAAAATTGCATTCACTGCTCCAGCCTTAACGAGTGTGCCGTCTTCATCGTCACCCTCTGGGAATACCTATATTGTAAGAATATTCATATCAACTCGCTTTCATGGGAAACCTCCGCTGCCTAATCCTGAACTGAAGCTGTGGATAGAGAAGTGGAAAAGTCGGTGCATAGCAGTTAGGAAGTTCAGTGGGTATGCGAATGATGATAATATTAACAAAGAAATCGAAGCTCTTGTAACTACCCTAAACAAGCAATCCATAACAATACAAGATACCACCTCCTATATCATTGCCAACTACAATGCTTCCTCTCATAATACTACTCAACGCTTAAATGAAGTGTGGATAAATATTTCGGGAATTGGGACGCAGTGCTGA 639 0.4163 REAVMETAMMHFLYYLFLAVCWCSGNILQAIELPNYTLILSQSDFQIRLYNESTWVSARVSGTSFDQSYRNGFQRLYQYIHGANSNSSKIAFTAPALTSVPSSSSPSGNTYIVRIFISTRFHGKPPLPNPELKLWIEKWKSRCIAVRKFSGYANDDNINKEIEALVTTLNKQSITIQDTTSYIIANYNASSHNTTQRLNEVWINISGIGTQC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02171 212 Pfam SOUL heme-binding protein 32 203 IPR006917 -
Vimu11g02171 212 SUPERFAMILY Probable bacterial effector-binding domain 22 204 IPR011256 -
Vimu11g02171 212 FunFam Heme-binding protein 2 31 209 - -
Vimu11g02171 212 Gene3D Regulatory factor, effector binding domain 30 207 IPR011256 -
Vimu11g02171 212 PANTHER HEME-BINDING PROTEIN-RELATED 29 203 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02171 Vimu-Chr11 37753290 37754169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02171 - - gmx:100500604 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02171 11 37753290 37754169 Vimu11g02171 11 37753290 37754169 ECH