Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02021 ATGGACCGAACCAACACCTCCAGCGCAGAGCAGGATCCCACTCAGACGCACCCGACCCGCCGCCACCTGGAGCCCCCATCCGGGTTGACTCCGGAGGAGTTCGCCGACCTCATACCCTCTATCATGGAGCACCACACCTACTCCATGACAGCGCGCCAATGCTCCTCCCTCCTTGCCCAACGAATCCACGCGCCGCCGCAAACTGTCTGGTCCGTCGTCCGCTGCTTCGACAACCCCCAGGCCTACAAGCACTTTATCAAGAGCTGCCATGTCAAGGAGGATTTCCAGCTCGTTGTGGGCTCCACTCGCGACGTTAACGTCATCTCCGGGTTACCGGCAGCCACCAGCACCGAGCGCCTCGACCTCCTCGACGACGAACGGCATGTCATCGGTTTCACCATCGTTGGCGGCGAGCACCGCCTCAGGAACTACCACTCCGTGACCTCCGTGCACGGCTTCGAGCGCGATGGCAAGATCTGGACCGTTGTTCTGGAATCTTACGTGGTGGATGTGCCCGAGGGGAACACCGAGGAGGACACGCGTCTCTTCGCTGACACCGTTGTGAAGCTCAACCTGCAGAAGCTCGCGTCTGTCACCGAAGGGATGAGCGGTGACGGTGACGGTGACGGTAACCGGAAGGGTAAGTCATAG 651 0.6114 MDRTNTSSAEQDPTQTHPTRRHLEPPSGLTPEEFADLIPSIMEHHTYSMTARQCSSLLAQRIHAPPQTVWSVVRCFDNPQAYKHFIKSCHVKEDFQLVVGSTRDVNVISGLPAATSTERLDLLDDERHVIGFTIVGGEHRLRNYHSVTSVHGFERDGKIWTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLASVTEGMSGDGDGDGNRKGKS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02021 216 SUPERFAMILY Bet v1-like 54 197 - -
Vimu11g02021 216 PANTHER - 48 197 - -
Vimu11g02021 216 FunFam Abscisic acid receptor PYR1 17 207 - -
Vimu11g02021 216 Pfam Polyketide cyclase / dehydrase and lipid transport 60 199 IPR019587 -
Vimu11g02021 216 Gene3D - 16 213 IPR023393 -
Vimu11g02021 216 CDD PYR_PYL_RCAR_like 54 200 - -
Vimu11g02021 216 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02021 Vimu-Chr11 32606408 32607058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02021 K14496 - gmx:100786749 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02021 11 32606408 32607058 Vimu11g02021 11 32606408 32607058 ECH
Vimu11g02021 11 32606408 32607058 Vimu11g02021 11 32606408 32607058 PCT