Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01857 ATGTATAGAAAGGTGCTTCTTACATTCGTTTTCGTGATTGTCCTTCTTCTTTCGTACTCAATTTTCATAGGCAACGTCGATGTTCGATCTTATTTCTTCCCTCATTTAATGTTATCCGCGTCTGCACCCGCTCCATGTGCACCTGATTTATCTCTTCGGGTCTTCATGTACGATCTCCCTCGCCGCTTCAACGTTGGCATGATTGACCGCCGCAATACGGCGGAGACACCCGTCACCGTGGAGGACTGGCCACCGTGGCCCACGAATTGGGGGCTGAAGAAGCAGCACAGCGTGGAGTACTGGATGATGGGGTCGCTTCTCCACGACGTCGAGGGCAGAGAGGTGGTTAGGGTTTCGGATCCGGAACTCGCCAATGCCTTCTTCGTCCCGTTCTTCTCTTCGCTCAGTTTCAACACGCACGGCCACAACATGAAGGATCCCGCCACGGAGACGGATCGCCAATTGCAGGTTGATTTAATGGAATTCTTAAAGAAATCCAAATACTGGCAGAGGTCGGGAGGTAGAGACCATGTATTTCCTGTCACCCACCCCAATGCCTTTAGGTTCCTACGAGATCAGTTGAATGATTCTATTCAGGTTGTTGTGGATTTTGGTCGCTACCCTAAGCGCATGTCTAATTTGAACAAAGATGTAGTGTCCCCATATGTGCATGTTGTGGAGTCTTTTACAGTAGATGAGCCTCAAGATCCGTATGAGTCTCGCTCCACGCTGCTTTTCTTCCGAGGGAGGACTTACCGGAAAGATGAAGGGATTGTCCGTGTTAAACTAGCAAAGATACTTTCTGGTTATGATGATGTTCACTATGAGCGAAGTGTTGCTACAGAAGAAAATATAAAATTGTCATCGAAAGGGATGCGTTCATCGAAGTTCTGTTTGCATCCAGCAGGAGACACACCGTCATCTTGTCGGCTTTTTGATGCCATTGTGAGTCACTGTGTTCCTGTCATTGTTAGTGATCAAATTGAGCTCCCATTTGAGGATGAGATTGACTACTCCCAGTTCTCGATTTTCTTCTCTACCAAAGAGGCATTACAGCCTGGCTACATGGTCGATCAACTTCGTAAATTTCCAAAACAGAAATGGACTGAAATGTGGAAGCAACTCAAAAACGTCTCCCATCATTATGAATTCCAGTACCCTCCTAAAAGAGAAGATGCTGTCAGTATGTTGTGGAGACAGGTCAAGTACAAACTTCCAGGGGTCAGCCTTTCTGTTCATAGAAGCCGGAGGTTAAAAATCCCAGATTGGTGGCTGAGGAAATGA 1284 0.4681 MYRKVLLTFVFVIVLLLSYSIFIGNVDVRSYFFPHLMLSASAPAPCAPDLSLRVFMYDLPRRFNVGMIDRRNTAETPVTVEDWPPWPTNWGLKKQHSVEYWMMGSLLHDVEGREVVRVSDPELANAFFVPFFSSLSFNTHGHNMKDPATETDRQLQVDLMEFLKKSKYWQRSGGRDHVFPVTHPNAFRFLRDQLNDSIQVVVDFGRYPKRMSNLNKDVVSPYVHVVESFTVDEPQDPYESRSTLLFFRGRTYRKDEGIVRVKLAKILSGYDDVHYERSVATEENIKLSSKGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDQIELPFEDEIDYSQFSIFFSTKEALQPGYMVDQLRKFPKQKWTEMWKQLKNVSHHYEFQYPPKREDAVSMLWRQVKYKLPGVSLSVHRSRRLKIPDWWLRK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01857 427 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 49 397 IPR004263 GO:0006486|GO:0016757
Vimu11g01857 427 Pfam Exostosin family 52 358 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01857 Vimu-Chr11 26190865 26194461 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01857 - - gmx:100817069 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01857 11 26190865 26194461 Vimu11g01857 11 26190865 26194461 ECH