LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu11g01833	ATGCGCTCTCTCACGGTTTACTCTGATTCTCCCGGTGGAGACCTTTCTTCCCTTCATCCAACGGCTCAGAGTTTCCTTAAGATGCCACGCGTCAGTAGACGTTGCAGATTGCATTTGATACCACGCAACAGAGTATGCAGGTGTGTTCTCGACGCGATTCCTTTGCTGATAATGAAGCAAGAAGGTATTAGAACAGAGATGACTAATCTGCTAATACAAACAGAAGAACCTTCTCAGAGTCAAACCCCGCTTCTAATTTCAATTCAACATCAACAACAAGCAGAGCAAAATGGGGATACTAATACTAATAGCAATAATAATGATACTAAGGAGAACGATGATGGTGAAGATGACAGAGAGAATGATTATGACGATGAGCTGGAAGAGGAAAGTGAAGTGGAGGAGAGCTTGGCGCGGTTGGAGTGGTTTCTGACGGTGTTAGGGTTCAACCAGCACTCGGTGTCGAGTTTGGTGGTTTCGTGGAGCTTGTTTGCGGCGGTTGGAGTGGCGGCGCCACTTGTGGCGCTGTCCATGTGTAAGTGCTCGGAGTGCGATAGGTATGAGATTCAGAGCTTTGAAATGGTGATCGTGGCGTTTCAGGCGACTCTCGCCGCCGTATCCTTGATCTGTCTCTCTCACAACCTCCGCAAGTACGGTCTCCGCAGGTTCCTCTTCGTCGACCGCTACTCCGGAAAGATGCATTGCTTTCACCGCGACTATGTCGCTCAGATTTCGGGATCTATGCGCTTGCTTTTTCTGTGGGTTTTGCCATGTTTCCTTCTGAAGACCGCTCGAGAAATCATTCGCATTTTCTATGTTCAACATGGGTCCTGGTTGCTTTCATTCGCTATTCTATCAGCTTTGATTATATCCTGGACTTATATGAGTACAATTTCTCTGTCAGCCTGCATTTTATTTCACTTGGTCTGTCGTTTGCAAGTGATCCATTTTGATGATTATGGGAAGCTCTTGCAAAGCGAAAGTGATGTTTTAGTTCTTATGGAAGAGCACATTCGGTTGCGTTATCATCTCTCCAAGATAAGTCATAGGTTCAGAATCTATCTGCTTCTGGAGTTCTTGGTTGTCACAGCTAGCCAGGTTGTGACGCTTTTGCAGGTCACTGGTTATGGTGAGATGCTTACATTCATTAATGGTGGAGACTTTGCTGTATCCACACTTGTTCAGGTGGTGGGCATCATCATTTGTTTGCATGCCGCAACAAGAATTTCTCATAGAGCTCAAGGCATTGTTTCCCTTGCAAGCAGGTGGCATGCAATGCTAACATGCACATCTTCTGAGGCACCACAATTGAGGAGCTCTGCTAGTGCTGGGACATTGGAGGCTGCAAACCATTTGAATGCTATACATTTAGACTATTCTGAAAGTGATCTAGAGTCAATGGATTATGCTGGAATGTTTTCGAATACCCAATGGACTTCTTATGTGTCTTCACATCACAAGAGACAAGCTTTTGGTATGTATTTCCTGTCTGAGGATTTAATGTTTATTGTTTTCTTCAAATATGCAGTGATGTATTTGCAGACAAATCCAGGAGGAATAACAATATTTGGATGGACAGTGGATCGGTCTCTAGTCAACACAATTTTTTTCCTTGAATTAAGTCTGGTTACCTTTGTTCTTGGTCAGGCGCTAATCTAA	1659	0.4436	MRSLTVYSDSPGGDLSSLHPTAQSFLKMPRVSRRCRLHLIPRNRVCRCVLDAIPLLIMKQEGIRTEMTNLLIQTEEPSQSQTPLLISIQHQQQAEQNGDTNTNSNNNDTKENDDGEDDRENDYDDELEEESEVEESLARLEWFLTVLGFNQHSVSSLVVSWSLFAAVGVAAPLVALSMCKCSECDRYEIQSFEMVIVAFQATLAAVSLICLSHNLRKYGLRRFLFVDRYSGKMHCFHRDYVAQISGSMRLLFLWVLPCFLLKTAREIIRIFYVQHGSWLLSFAILSALIISWTYMSTISLSACILFHLVCRLQVIHFDDYGKLLQSESDVLVLMEEHIRLRYHLSKISHRFRIYLLLEFLVVTASQVVTLLQVTGYGEMLTFINGGDFAVSTLVQVVGIIICLHAATRISHRAQGIVSLASRWHAMLTCTSSEAPQLRSSASAGTLEAANHLNAIHLDYSESDLESMDYAGMFSNTQWTSYVSSHHKRQAFGMYFLSEDLMFIVFFKYAVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLGQALI	552

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu11g01833	552	PANTHER	RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K	100	551	IPR021924	-
	Vimu11g01833	552	MobiDBLite	consensus disorder prediction	89	130	-	-
	Vimu11g01833	552	Pfam	Protein of unknown function (DUF3537)	136	538	IPR021924	-
	Vimu11g01833	552	MobiDBLite	consensus disorder prediction	89	108	-	-
	Vimu11g01833	552	MobiDBLite	consensus disorder prediction	111	130	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu11g01833	Vimu-Chr11	25560052	25563473	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu11g01833	-		-	gmx:100813872	738.028

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu11g01833	11	25560052	25563473	Vimu11g01833	11	25560052	25563473	ECH