Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01829 ATGAGATACGTAGAAGACAAAGGGTGCTATAACAATCATGGACCAACACAAGAGATCCCAAATAACAGTGCGGCGTATTCAGAGTTTCACAAAGGAAAGGATGCTACTCGTATCCCCCACCACCACCATCGAACAACTATGGGAAAGCCAACCCCTTCTAAGTGGGATGATGCACAAAAGTGGCTTGTGGGATTGTCAAAAGGAGGAGAGAAAAGTCACTCCAAAAACAGACCAAGAAACTCAAATGCAGATGATTTGAGACTGATAGCTCCTGTGCCACAGAAGGAGCATGATTACTCAAGTAGTGAGAAGGAAGAGGAAGACAATGATGCATCATCTCATGATTTGGTGACTACTTCTACTGCCAATGCCATTGCTGCTCAATATGAAGCTGATGCCAAAAGGGTAGAATGTGACGAGTCAAATTGGAGAAACAGTATTAAGCCTTCAGAAAACACAATCCAGGTCCAATCAATATGTTTCAGAGACATGGGAACTGAGATGACACCAATTGCTAGTCAAGAGCCTTCAAGAACTGGCACCCCAATTAGAGCCACAACTCCTGCAACTAGAAGCCCTATTCATTCAGGGACCTCAACCCCAATGAGATGTCAAAATGGGTTGCAAGTTGTTGAGGGTGACCGTAACACTGCTAGGCACTGTGCAGAAGGATCAACAAGCCCCTGCAAGAGGATTGAAGATCAAGCTAGAAAGTTGAGTCCTCTAGAAAGCCGAGCAATGGCTTGGGATGAGGCAGAACGTGCCAAATACATGGCCAGGTTCAAGCGTGAAGAGGTGAAGATTCAAGCCTGGGAAAATCACCAGATTAGAAAAGCTGAAATGGAGATGAAGAAAATGGAGCTCATAAACGGTGATTTTAACCTTTCCAACGCTGAAGATGATAGCTCATCTTTTGATGCCCTGTTAACAACTCCAAAGCACATCTCAGTGAAAGCTGAGAGAATGAAAGCTTTGGCACAAGAAAGGTTTGCAAATAAACTGGCTTCGACTAAGAGGGTAGCTGAAGAGAAACGGGCAAATGCACAGGTGAAGCTGAATGACAAGGCTTTGAGGACTACCGAAAGGGTAGAGTATATACGTCGAACAGGACATGTGCCATCTTCTTTCTCTTTCAACTTTAAGTTGCCTTCCATGTGTTGGTAG 1164 0.4442 MRYVEDKGCYNNHGPTQEIPNNSAAYSEFHKGKDATRIPHHHHRTTMGKPTPSKWDDAQKWLVGLSKGGEKSHSKNRPRNSNADDLRLIAPVPQKEHDYSSSEKEEEDNDASSHDLVTTSTANAIAAQYEADAKRVECDESNWRNSIKPSENTIQVQSICFRDMGTEMTPIASQEPSRTGTPIRATTPATRSPIHSGTSTPMRCQNGLQVVEGDRNTARHCAEGSTSPCKRIEDQARKLSPLESRAMAWDEAERAKYMARFKREEVKIQAWENHQIRKAEMEMKKMELINGDFNLSNAEDDSSSFDALLTTPKHISVKAERMKALAQERFANKLASTKRVAEEKRANAQVKLNDKALRTTERVEYIRRTGHVPSSFSFNFKLPSMCW 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01829 387 MobiDBLite consensus disorder prediction 97 113 - -
Vimu11g01829 387 MobiDBLite consensus disorder prediction 1 114 - -
Vimu11g01829 387 PANTHER OS02G0116800 PROTEIN 47 386 - -
Vimu11g01829 387 Pfam Remorin, C-terminal region 243 374 IPR005516 -
Vimu11g01829 387 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01829 Vimu-Chr11 25433796 25435862 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01829 - - gmx:100813335 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01829 11 25433796 25435862 Vimu11g01829 11 25433796 25435862 ECH