Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01826 ATGCATTCTTCAACCACATCAATCTCTTCCAATTACCCTCTCATTTCTGCTTTCGTTGCTTTTGCCCTTGCCCAATCCATCAAGTTCTTCACCACCTGGTTTAAGGAAAGAAGATGGGATCTTAAGCAATTAGTTGGATCTGGTGGAATGCCATCATCTCATTCAGCTACTGTCACTGCTCTTGCATCTGCCATTGGGATGCAAGAAGGCTTTGAAGGACCACTTTTTGCTATTTCCTTCGTTTTCGCTTGTACTGTGATGTATGATGCTACTGGTGTAAGATTGCAAGCAGGACGCCAAGCAGAGGTTTTAAACCAAATTGTGTATGAACTTCCTTCTGAGCATCCTCTAGCTGAAAGGAGACCACTTCATGAACTTCTTGGGCACACACCCCCTCAGGTTACCATTTTTCATTGCATTGTTTCCATAGTTATAATTATTTGA 444 0.4234 MHSSTTSISSNYPLISAFVAFALAQSIKFFTTWFKERRWDLKQLVGSGGMPSSHSATVTALASAIGMQEGFEGPLFAISFVFACTVMYDATGVRLQAGRQAEVLNQIVYELPSEHPLAERRPLHELLGHTPPQVTIFHCIVSIVIII 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01826 147 Pfam Divergent PAP2 family 10 136 IPR003832 -
Vimu11g01826 147 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 4 143 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01826 Vimu-Chr11 25345243 25346974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01826 K09775 - pvy:116126451 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01826 11 25345243 25346974 Vimu11g01826 11 25345243 25346974 ECH
Vimu6g01533 6 14399829 14400925 Vimu11g01826 11 25345243 25346974 PCT