Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01641 ATGGTGGCGAGAGGCGTGCCGGCGATCACGTTGGCGGCCGTGGCCGCCCTTGACTTAACGGAATCCTCCAACTGGTGGCGGGACATCAACGAGTCTCCGCTATGGCAGGATCGCATCTTCCACCTCCTCGCCATCCTCTACGGAATCGTCGCCGCTGTTGCTCTGGTTCAATTAGTGCGAATACAATTGAGAGTGCCAGAATATGGTTGGACCACGCAGAAGGTCTTTCACTTTCTCAATTTCTTGGTGAATGGGGTTCGGTGTTTTGTTTTCGTCTTCCGTCGGGATGTGCAGAAGTTACAGCCAGAGATTGTTCAACATATCTTACTCGACGTGCCTAGTCTTGCTTTCTTTACAACCTATGCTCTATTAGTACTGTTCTGGGCTGAGATTTATTACCAGGCAAGTTCAACTTGCGGTGATGCCCGCGCTGTATCTACTGATGGTCTCAGACCAAGTTTCTATACTATTAATGCTGTGGTTTATGTTATTCAGATTGCTTTATGGTTGATATTATGGTGGAAACCTATCAGCGTGCTTGTCATCCTGTCTAAGATGTTCTTTGCAGGTGTCTCTTTGTTTGCAGCCCTTGGCTTTCTTCTCTATGGTGGGAGACTATTCTTGATGCTGCAACGCTTTCCTGTTGAATCCAAAGGCAGACGGAAGAAGCTGCAAGAGGTTGGCTATGTGACTACCATATGCTTTTCATGTTTCCTTATCAGATGCGTTATGATGTGCTTCAATGCATTTGATAGAGCTGCTGACCTTGATGTCTTGGACCATCCCATTCTGAATTTTATATATTACCTGTTGGTGGAAATATTGCCTTCTTCTTTGGTCCTTTTCATTTTGAGGAAGCTGCCACCAAAACGTGGTATCACACAATATCATCCCATTCGCTGA 903 0.4607 MVARGVPAITLAAVAALDLTESSNWWRDINESPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNFLVNGVRCFVFVFRRDVQKLQPEIVQHILLDVPSLAFFTTYALLVLFWAEIYYQASSTCGDARAVSTDGLRPSFYTINAVVYVIQIALWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDRAADLDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01641 300 PANTHER TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1 22 298 IPR040226 -
Vimu11g01641 300 Pfam THH1/TOM1/TOM3 domain 22 300 IPR009457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01641 Vimu-Chr11 20435520 20441351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01641 - - gmx:100811134 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01641 11 20435520 20441351 Vimu11g01641 11 20435520 20441351 ECH