Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01629 ATGTTGACTTCTGCATCTTCCTCCATCTTCTTCTTCATCCCCACTCCAAAGCCCCGACATTCTTCTCGCTTCACCGTTCGGGCTCACTCCAAATCCCCCACTCTCCCCAACCTCAAAGCCCTCGCTGGCGCCGCAGTCTTCGCCGCCGTCGCCCTCCAATTCCCCTCCGCACGCGCCTCTCCTCCGCCTTCGCCCCCTCTCCAAACCGACCACCTCCACGAAGAATCCCTCACGCCGCTCTCAGACATCCTCGAAACGAACGCCGAGGCCCTCGCCACTCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGACGAGGCACGCGCCATCCTCAAGCGCCTAATCGCCGCGCAGCCCGACGCCGTCGACTGGAAGTTCCTCGCAGCGCGACTCGCCGCCGAGACCGGCGACGCCGACGGTGCTCGCGCGTACTACGAGGATGTTCTGGCGGCGAACCCGCTTTCGTTCGAGGCGCTGTTCGAGAACGCACTGCTGATGGACCGGTCAGGGGAAGGGGAAGCGGCTATGCGGCGGCTGGAGGAGGCGCTGCGCGTGGCCGAGGAGGACAACAAGAAGAAGGAGGCGAGGGACGTGAGGCTCATCATAGCGCAGATCACGTTTCTTCAGAAGAATGTGGATGAAGCGTTAGGGATTTATGATCAGCTCACGAAAGAGGATTCGAGCGATTTTAGACCTTACTTTTGCAGAGGCATGATTTATAGCTTGCTTGATAGAAACGAGGAGGCAAAGGAGCAGTTTACAAAGTACAGAGAGTTGAGTCCCAAGAAATTTGAGGTGGATGGGTATTTGAGAACCCCTTTGTCAAGGATGAAGCTGTTTAGCACCGATGAGAGCTGA 867 0.5836 MLTSASSSIFFFIPTPKPRHSSRFTVRAHSKSPTLPNLKALAGAAVFAAVALQFPSARASPPPSPPLQTDHLHEESLTPLSDILETNAEALATLKSLLQQKLELGEDDEARAILKRLIAAQPDAVDWKFLAARLAAETGDADGARAYYEDVLAANPLSFEALFENALLMDRSGEGEAAMRRLEEALRVAEEDNKKKEARDVRLIIAQITFLQKNVDEALGIYDQLTKEDSSDFRPYFCRGMIYSLLDRNEEAKEQFTKYRELSPKKFEVDGYLRTPLSRMKLFSTDES 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01629 288 Pfam Tetratricopeptide repeat 129 158 IPR019734 GO:0005515
Vimu11g01629 288 SUPERFAMILY TPR-like 96 266 IPR011990 GO:0005515
Vimu11g01629 288 Gene3D Tetratricopeptide repeat domain 202 274 IPR011990 GO:0005515
Vimu11g01629 288 Gene3D Tetratricopeptide repeat domain 69 201 IPR011990 GO:0005515
Vimu11g01629 288 ProSiteProfiles TPR repeat profile. 233 266 IPR019734 GO:0005515
Vimu11g01629 288 Coils Coil 208 228 - -
Vimu11g01629 288 Pfam Tetratricopeptide repeat 236 265 IPR019734 GO:0005515
Vimu11g01629 288 PANTHER TRANSMEMBRANE PROTEIN 89 267 - -
Vimu11g01629 288 Coils Coil 179 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01629 - - gmx:100780000 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01629 11 20250671 20251537 Vimu11g01629 11 20250671 20251537 ECH