Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01256 ATGGTTGCTATGCCTCCAAATATATATCTAGTTCTCAGTCAAATGGGGAAGCAAAAGTTACCTGTAGATGTTGCAAAGAAGAGTGTCACTGCTTATTGCCCTCAAGAACAAACTCACACTTTGGCAATTCAACTTTGGGATCACATAGTTCAAAGAAAGAATGTGGAATATGCTGTCCAGTATAATAAACGAGCGGTTCTCTGTGGAGTTTCTTACAGAAGGAAATTCAGACTCAGAGGAATCATTAATGACATTACTAACATGAAGGAACTGCTGATCAAGAATTTTGACTTTCCAAATGAGTGCATACGAATCCTCACAGAACATGGGGAAAACGGCAATTTGATACCAACGAAACACAACATAATGGAGTCCTTAAGGTGGCTTGTGAAGGACGCTGAGCCAGGAGACTCATTAGTGTTTTACTTCTCGGGACACGGTTCTCAGCAGCCAGATTTGAAAGAAGATGAAATTGATGGGTTTGATGAGACTCTTTGCCCTGTTGACTATTTGATAGAAGGAATGATCATTGACAATGAAATCAATTCCACCATAGTTTGGCCACTAAAGAAAGGTGTCACACTTCATGCTATTGTTGATGCATGTCATAGCGGCACAATTCTTGATCTTTTGTTTGTTTACAATCAAGAAAGTGGGATTTGGGAGGATAACAAGCCCCCATCAAAAGAACCTATAAGAAAACATTCAAGTGGTGGATTGGCGATTTGTCTTAGTGCTTGTGAAGATAATCAGACAGCTTGTGATAGCTCTGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTATCTTTTCACAAAAGCAATCAGAGAATACCCTGGAATAACTTATGGGCGTCTCCTACAAAATATGCATGAAGAGATTAAGAAGATTAACAGAAGCAAATGCAATAACCGCATATTGCAACATATCTTCAATCGTAAAATTGCACAGGTTTGGATTCCATCACCATTCTTTCTGTCTTCAAATTATATATGA 999 0.3874 MVAMPPNIYLVLSQMGKQKLPVDVAKKSVTAYCPQEQTHTLAIQLWDHIVQRKNVEYAVQYNKRAVLCGVSYRRKFRLRGIINDITNMKELLIKNFDFPNECIRILTEHGENGNLIPTKHNIMESLRWLVKDAEPGDSLVFYFSGHGSQQPDLKEDEIDGFDETLCPVDYLIEGMIIDNEINSTIVWPLKKGVTLHAIVDACHSGTILDLLFVYNQESGIWEDNKPPSKEPIRKHSSGGLAICLSACEDNQTACDSSVFGGKGMNGVLTYLFTKAIREYPGITYGRLLQNMHEEIKKINRSKCNNRILQHIFNRKIAQVWIPSPFFLSSNYI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01256 332 PANTHER METACASPASE-4 62 303 - -
Vimu11g01256 332 Gene3D - 10 312 - -
Vimu11g01256 332 Pfam Caspase domain 63 298 IPR011600 GO:0004197|GO:0006508
Vimu11g01256 332 SUPERFAMILY Caspase-like 66 297 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01256 Vimu-Chr11 13716024 13717821 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01256 K22684 - gmx:100796640 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01256 11 13716024 13717821 Vimu11g01256 11 13716024 13717821 ECH