Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01215 ATGCAGAATCCAACACTTGCGACAACCCTTTTCGCCATTTTGCTCCTTGTCCACTCCTCACTCGCTCTCAAGGAAGGACAAACATGCGTAGCAGACAGGAACTGCGACTCGGGTTTGCACTGCGAAACGTGCGTGGCCAATGGGAACGTGCGACCAAGATGCACTCGCATTCAACCCATCAACCCCACTTCAAAGGTAAAAGGGTTGCCGTTTAATCGGTATTCATGGCTGACGACGCATAATTCATTTGCGATTTTGGGTCAGAAACCAATGACGGGTTCTGTTATTCTTGCTCCCACCAATCAACAAGACTCCATCACAAGCCAACTTAACAATGGAGTACGAGGGTTGATGCTTGACATGTATGACTTCCAGAATGATGTTTGGCTGTGTCACTCTTTTGGTGGTCAGTGCTACAACTACACAGCTTTTCAACCTGCCATCAATGTTCTGAAAGAGATTCTAGTATTTCTAGAGGCAAATCCATCAGAGATTGTTACCATTTTCATTGAGGATTACGTTACATCACCAAAAGGCCTAACAAAGGTGTTTGATGCTGCTGGACTGAGAAAATACTGGTTTCCAGTGTCTAGAATGCCCAAAAATGGTGGAAACTGGCCAACAATTGATGATATGATCAAGAAGAATCAGCGTTTAGTTGTCTTCACTTCAAAAGCATCCAAGGAATCTTCTGAAGGGATAGCCTATGAATGGCGATATTTAGTAGAAAACCAGTATGGAAATGGAGGAATGAAGGTTGGTTCATGTCCAAATCGTGCAGAGTCACCATCTATGAACACAACTTCAAGATCATTAGTTCTGGTGAACTTCTTTCGAGATCTTCCTGATGTAACCAAGTCTTGCAAAGACAATTCAAGTCCTTTGCTTGATATGGTCAGTACATGCTATGGAGCAGCTGGCAAACGTTGGCCTAATTTCATTGCTGTTGACTTCTACAAGAGAAGTGATGGAGCAGGAGCATCAGAAGCACTAGATGTTGCTAATGGTCATCTAGTGTGTGGATGTGAAAACATTGCCACCTGCAAGGCTAACATGACATTTGGAGCATGTGAGGTACCTGAGGCTGAAGCAACTCCTCCTGCAGCCGCAGGTGACACTAGCTTTGGGGTTGGAAATTGCAAGCAAGTTGATTTGTTGTGGTGTTTTGCCACCACTGTTTTTGGGGCCATGCTTATGGCATTGTGA 1206 0.4444 MQNPTLATTLFAILLLVHSSLALKEGQTCVADRNCDSGLHCETCVANGNVRPRCTRIQPINPTSKVKGLPFNRYSWLTTHNSFAILGQKPMTGSVILAPTNQQDSITSQLNNGVRGLMLDMYDFQNDVWLCHSFGGQCYNYTAFQPAINVLKEILVFLEANPSEIVTIFIEDYVTSPKGLTKVFDAAGLRKYWFPVSRMPKNGGNWPTIDDMIKKNQRLVVFTSKASKESSEGIAYEWRYLVENQYGNGGMKVGSCPNRAESPSMNTTSRSLVLVNFFRDLPDVTKSCKDNSSPLLDMVSTCYGAAGKRWPNFIAVDFYKRSDGAGASEALDVANGHLVCGCENIATCKANMTFGACEVPEAEATPPAAAGDTSFGVGNCKQVDLLWCFATTVFGAMLMAL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01215 401 Gene3D Phosphatidylinositol (PI) phosphodiesterase 61 331 IPR017946 GO:0006629|GO:0008081
Vimu11g01215 401 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 70 178 - -
Vimu11g01215 401 CDD PI-PLCc_At5g67130_like 61 331 - -
Vimu11g01215 401 SUPERFAMILY PLC-like phosphodiesterases 68 339 IPR017946 GO:0006629|GO:0008081
Vimu11g01215 401 PANTHER UNCHARACTERIZED 27 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01215 Vimu-Chr11 13231131 13234845 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01215 - - gmx:100819253 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01215 11 13231131 13234845 Vimu11g01215 11 13231131 13234845 ECH