Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01205 ATGTTTGGGTTAATTGGAAGAAAGGCCAATTTATTGGGAGGATCGGGAAGAAGGTGGTTGAACTTGGCAGCAGCAACCGCAACAACCACTACCAATGGTGGGGCCATGGAGGAGTTGCTTGCGCAACTGCAATCCAACGTTCAGAAGGCTATTGCAGGTGGAGGACCCGAGGCTGTGAAGAGGAACAGGAGCAGAAACAAATTTCTTCCCCGCGAAAGAATCGATCGCTTTCTTGATCCTGGCTCTTCCTTCCTCGAGCTTTCACAGCTGGCAGGACATGACTTGTATGAAGAGCCCTTGCCTTCTGGAGGGGTCGTTACTGGGATAGGTCCTGTGCATGGGCGACTGTGTATGTTTGTGGCCAATGATCCCACTGTGAAGGGAGGGACTTACTATCCCATTACTGTTAAGAAGCACCTCAGGGCACAGGAGATTGCTGCTCAGTGCAAATTGCCCTGTGTATATCTTGTTGACAGTGGAGGAGCTTTTCTTCCCAAGCAAGCTGAAGTGTTTCCAGACAAAGAAAACTTTGGTAGAATATTCTACAATCAAGCTTTAATGTCTTCTGAAGGAATTCCTCAAATTGCATTGGTATTGGGCTCTTGCACTGCTGGTGGGGCATATATACCGGCAATGGCTGATGAAAGTGTGATGGTCAAGGGTAACGGCACCATTTTTTTAGCAGGGCCACCTCTTGTTAAGGCTGCTACTGGTGAAGAAGTCTCCGCAGAGGATTTGGGAGGTGCCACTGTGCACTGCAAGACGTCCGGTGTTTCTGATTATTTTGCTCAAGATGAACTCCATGCACTTGCGCTTGGGAGGAATATAATTAAGAATTTGCATATGGCTGGGAAAGATCCCTTGGCAAATGGATTGCAAAATATAAACCATGAATATAAAGAGCCGTTGTATGATGTCAATGAACTTCGTTCTATTGCTCCCACTGATCTTAAGAAACAGTTTGATATCCGATCAGTTATTGATCGAATTGTTGATGGAAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTACACTTGTAACGGGATTTGCTAGGATTTTCGGACAGCCTGTTGGAATTATTGGAAACAATGGGATTTTATTCAACGAATCTGCACTCAAAGGGGCCCATTTCATTGAATTATGCACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACTGGATTCATGGTTGGCTCAAGATCTGAGGCAAATGGCATAGCAAAGTCTGGAGCAAAAATGGTTATGGCTGTTTCTTGTGCAAAGGTACCAAAAGTTACTATAATGGTTGGAGGAAGCTTCGGTGCAGGAAATTATGCAATGTGTGGTCGTGCCTATAGTCCGAATTTCTTGTTCCTTTGGCCAAATGCTAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGTGTACTGGCTCAAATAGAGAAAGGCAACAAGAAAAAGCAAGGAATTCAGTGGAATAAGGAAGAAGAGGAAAAGTTCAAAGCGAAAGTGGTGGAGGCTTATGAGAAAGAAGCAAGTCCTTATTACTCAACAGCACGGCTATGGGACGATGGAATCATTGATCCAGCTGATACAAGAAAAGTCATTGGTCTCTGCATCTCTGCGTCCTTGAACCTTGCCATTGAAAAAACAAAATATGGTGTATTTAGAATGTGA 1668 0.4442 MFGLIGRKANLLGGSGRRWLNLAAATATTTTNGGAMEELLAQLQSNVQKAIAGGGPEAVKRNRSRNKFLPRERIDRFLDPGSSFLELSQLAGHDLYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQAEVFPDKENFGRIFYNQALMSSEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDELHALALGRNIIKNLHMAGKDPLANGLQNINHEYKEPLYDVNELRSIAPTDLKKQFDIRSVIDRIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKVTIMVGGSFGAGNYAMCGRAYSPNFLFLWPNARISVMGGAQAAGVLAQIEKGNKKKQGIQWNKEEEEKFKAKVVEAYEKEASPYYSTARLWDDGIIDPADTRKVIGLCISASLNLAIEKTKYGVFRM 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01205 555 FunFam Methylcrotonoyl-CoA carboxylase beta chain 294 555 - -
Vimu11g01205 555 FunFam Methylcrotonoyl-CoA carboxylase subunit beta 20 286 - -
Vimu11g01205 555 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 25 555 IPR045190 -
Vimu11g01205 555 SUPERFAMILY ClpP/crotonase 36 278 IPR029045 -
Vimu11g01205 555 Gene3D - 294 555 - -
Vimu11g01205 555 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 301 547 IPR011763 GO:0016874
Vimu11g01205 555 Pfam Carboxyl transferase domain 62 545 IPR034733 -
Vimu11g01205 555 Gene3D - 23 284 - -
Vimu11g01205 555 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 36 292 IPR011762 -
Vimu11g01205 555 SUPERFAMILY ClpP/crotonase 296 555 IPR029045 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01205 30 555 Acyl Lipid Metabolism Gene Families AT4G34030 80.989 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01205 K01969 - gmx:100777651 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01205 11 13138666 13143655 Vimu11g01205 11 13138666 13143655 ECH