Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01203 ATGTCGTTGCTGCTACTGCCTCAACCTTCCACTACCCTCTCTCCGGTCACTGCCTCTGCCTTGGCCGCACGCATACCCTTCGCCACCGTCACGCCTCCGCGGCAGAGAACGTTCACTGCGAAAGCCACACTTTCAACCTCTCTCCTTGAAACAGCACCAAATGCAATCCCTCCGAAGAAGGTTCTGGTTCCCATCGGTTTGGGCACCGAAGAAATGGAAGCCGTTATCATGATTCACGTGCTGCGACGCGCCGGAGCTGATGTCACCGTCGCCTCCGTGGAGCCGCAGCTCCAAGTAGAAGCTGCCGGAGGCACCAAACTAGTGGCCGACACCGACATTTCCACGTGTTCCGATGAAATTTTTGACCTCGTTGCTTTACCCGTTAGTTCTCTAACCGAAACCACTGTTGGTACTGCTGTTACTGGAGGAATGCCAGGCTCTGCAAGACTACGGGATTGCGAAGTTCTGCGAAAAATCACAAGCAAACAAGCTGAGGAAAACAGGCTCTATGGAGCTATTTGTGCAGCTCCCGCTGTCACGCTTTTGCCATGGGGCCTTTTGAAGAGAAAGAAGATAACTTGCCACCCTGCCTTCTTCGACAGCCTTCCAACCTTTTGGGCCGTTAAATCAAATCTTCAGGTTTCCAGAGGACTCACAACCAGCCCGGGCCCTGGAACTACTTACCAGTTTGCTTTGTCCTTGGCCGAGCAGCTATTTGGAGAGTCTGTAGCTAGGGAGGTTGCAGAATTGTTGTTGATGAGAGCGGATGATGATAATGCAACTAAGAAGGAGTTCAATAAAGTTGAATGGTCCGTTGCCCATCACGCCCCTAGTGTCCTCATACCAATTGCACATGGTTCTGAAGAGATTGAAGTAGTGACTGTGGTAGATATTCTCAGGCGCGCAAAAGCTAACGTCATAGTTGCTTCAGTTGAGAAATCTCTTGAAATTTTGGCTTCACAGGGAACAAAAATTGTTGCTGATATATTAATTAAGGATGCTCAAGACTCAGCACATGATTTGATTATTCTTCCAGGAGGAACTGCTGGTGCGCAAAGACTAAGCAAATCTAGAATTCTGAAGAAACTTCTTAAAGAACAAAGTTCTGCTGGAAGAATATATGGGGCGATCTGTTCTTCACTTGCCATTCTACATAAACAAGGTTTACTTAAGGTATTAGCTGCCCTACTGTTACCATTGTGCTTGTTTCCTGATCTAATTCTTGAGGAAATCGTCACTGAAATGAGATATTTGTTACCGTTGCAGGACAAGAGGGCCACGGCCCATCCCTCTGTCTTAGACAAGGTTAATGAAGAAGCAATAAATGGGGCCAAAGTAGTAATTGATGGAAATTTGATCACTAGTGAGGGACTTGCCACTGTAACAGATTTTGCATTGGCCATTGTGAGCAAGCTATTTGGTAATGGAAGAGCTAAAAGCGTAGCAAAAGGCCTTGTTTTTGAGTATCCTGGGTAG 1476 0.4715 MSLLLLPQPSTTLSPVTASALAARIPFATVTPPRQRTFTAKATLSTSLLETAPNAIPPKKVLVPIGLGTEEMEAVIMIHVLRRAGADVTVASVEPQLQVEAAGGTKLVADTDISTCSDEIFDLVALPVSSLTETTVGTAVTGGMPGSARLRDCEVLRKITSKQAEENRLYGAICAAPAVTLLPWGLLKRKKITCHPAFFDSLPTFWAVKSNLQVSRGLTTSPGPGTTYQFALSLAEQLFGESVAREVAELLLMRADDDNATKKEFNKVEWSVAHHAPSVLIPIAHGSEEIEVVTVVDILRRAKANVIVASVEKSLEILASQGTKIVADILIKDAQDSAHDLIILPGGTAGAQRLSKSRILKKLLKEQSSAGRIYGAICSSLAILHKQGLLKVLAALLLPLCLFPDLILEEIVTEMRYLLPLQDKRATAHPSVLDKVNEEAINGAKVVIDGNLITSEGLATVTDFALAIVSKLFGNGRAKSVAKGLVFEYPG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01203 491 NCBIfam DJ-1 family protein 60 249 IPR006287 -
Vimu11g01203 491 Gene3D - 271 489 IPR029062 -
Vimu11g01203 491 Gene3D - 52 266 IPR029062 -
Vimu11g01203 491 Pfam DJ-1/PfpI family 59 237 IPR002818 -
Vimu11g01203 491 Pfam DJ-1/PfpI family 421 470 IPR002818 -
Vimu11g01203 491 Pfam DJ-1/PfpI family 278 391 IPR002818 -
Vimu11g01203 491 SUPERFAMILY Class I glutamine amidotransferase-like 58 254 IPR029062 -
Vimu11g01203 491 SUPERFAMILY Class I glutamine amidotransferase-like 278 488 IPR029062 -
Vimu11g01203 491 CDD GATase1_DJ-1 279 472 - -
Vimu11g01203 491 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 58 252 - -
Vimu11g01203 491 CDD GATase1_DJ-1 61 238 - -
Vimu11g01203 491 FunFam Protein DJ-1 homolog C 54 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01203 Vimu-Chr11 13129443 13133104 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01203 - - gmx:100777134 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01203 11 13129443 13133104 Vimu11g01203 11 13129443 13133104 ECH