Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01192 ATGTTGACAAAGGGTAAAGCTCCATCACGTATTACTAAGGAAATGCAAGTAAAGATTGGAAAATGCTCAGAGTCAATGTGGAAGTTAACATATTATGCTGCTGTTGAAGCATTCATTATTAAAATTACCTACAAGGAACCCTGGTTCAGTAATACGAAATTATACTTCAATGACTGGCCAAATCATGAGTTGAAGATTGGCTCCATAATCCTCGCCCTTCATGATGCAAGTGACGTGTTCATGGAAGCTGCCAAGGTTTTCAAGTATTCTGGAAGGGAGTTTGGTGCAATTTCGTGGCTCATATTGCGGCTAATTTTCTTTCCTTTTTGGGTTATTAAGGCAACTAGCATTGATCTTCAACAGTGCCTAAACCTGTCAGAAGGTTTTGACATGTTTCTCTACTACATTTTTAATACAATGCTCATTATGCTACTCATCTTCCATATATACTGGTGGAAGCTCATATGTGCAATGATCTATCGACAGCTGAAAAATAGGGGAAAGGTTGGCGAGGATATAAGATCTGGTAAGCAGACGAAGGATTTTGTTGAGTTTTCTTTGTTCGCGATGATTGGTGATAGATCTGATGATACTGCTTTTGACTTGTCTATAGATTTTTAG 621 0.3816 MLTKGKAPSRITKEMQVKIGKCSESMWKLTYYAAVEAFIIKITYKEPWFSNTKLYFNDWPNHELKIGSIILALHDASDVFMEAAKVFKYSGREFGAISWLILRLIFFPFWVIKATSIDLQQCLNLSEGFDMFLYYIFNTMLIMLLIFHIYWWKLICAMIYRQLKNRGKVGEDIRSGKQTKDFVEFSLFAMIGDRSDDTAFDLSIDF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01192 206 SMART lag1_27 20 164 IPR006634 GO:0016020
Vimu11g01192 206 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 13 65 IPR016439 GO:0046513|GO:0050291
Vimu11g01192 206 Pfam TLC domain 62 156 IPR006634 GO:0016020
Vimu11g01192 206 PIRSF LAG1_LAC1 4 66 IPR016439 GO:0046513|GO:0050291
Vimu11g01192 206 PIRSF LAG1_LAC1 61 184 IPR016439 GO:0046513|GO:0050291
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01192 Vimu-Chr11 12909521 12913376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01192 - - ccaj:109801348 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01192 11 12909521 12913376 Vimu11g01192 11 12909521 12913376 ECH