Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01189 ATGGATTGTTGGACGCTAGCGTTGGGCGTGCACCTGGGTCGTTGGACAATGGCCTTGTTGGGCACTGGGCCATGCTTCTTTCTCTTCCGTTTTGAACAAAACCATCAAAAAAGCTTCCCAAATCGCAAGCTTTTTGGTGGGGCAGTGGTTCATGACAGTATGAGCCCCTCCGTCTTCCTCCTATGGCTTGTCACTATTCCTGTCCTAGCCTACTCCGCCCAAACTTCTGTCCCACCTCTCGGGTATTATTTAGACTGCGGAGGCTCGAAGGAGGTAACGGTAGACGGTCTGAAATATGTTCCTGATGGAAGCTACATCAAGGTGGGACACACCAGCCCCATCAACAAGCCTGGTTTGTTGCCCACACTGTCCACGCTGCGTTATTTTCCCGACGCGTCGGCCGGAAAATATTGCTATTCGTTGCCGGTGATCAAAGGAAGCAAATATCTGGTGAAGACCATGTACTACTACGGAGGATTCGATGGAGGGACGCAGCCTCCAGTGTTCGATCAAATCGTTGAAGGGACAAGATGGGGCGTTGTGAACACCACTGAGGACTATGCCAAAGGTCTTAGCTCCTATTTTGACATCACGGTGGTGCCATCGGGGAAGACCTTGAGCGTCTGCTTGGCCAGGAACTCATACACTGGTAGCTCAAGCCCCTTCATTTCAGCCCTGGAGGTCAGGATCTTGGAACCCTCTTTGTATAATCCCACTGACTTCTCCAAGCATGCCCTTGTAACCGTTGCCAGAAGTGTCTTTGGAGGTCAAGATATCATTGGGTAA 786 0.5102 MDCWTLALGVHLGRWTMALLGTGPCFFLFRFEQNHQKSFPNRKLFGGAVVHDSMSPSVFLLWLVTIPVLAYSAQTSVPPLGYYLDCGGSKEVTVDGLKYVPDGSYIKVGHTSPINKPGLLPTLSTLRYFPDASAGKYCYSLPVIKGSKYLVKTMYYYGGFDGGTQPPVFDQIVEGTRWGVVNTTEDYAKGLSSYFDITVVPSGKTLSVCLARNSYTGSSSPFISALEVRILEPSLYNPTDFSKHALVTVARSVFGGQDIIG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01189 261 Gene3D - 80 230 - -
Vimu11g01189 261 PANTHER OS07G0107800 PROTEIN-RELATED 83 257 - -
Vimu11g01189 261 Pfam Malectin-like domain 84 257 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01189 Vimu-Chr11 12852575 12857230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01189 71 257 Receptor kinase-like Gene Family AT2G37050 34.555 2.11e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01189 - - gmx:100803695 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01189 11 12852575 12857230 Vimu11g01189 11 12852575 12857230 ECH