Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01184 ATGTATCCTGCAGTGGATGAACATGATGAGGCATATGAAGTTCATCATAACCATCCAAGCTATATTGTTCCAGTGGTGGTTCCTCCAACTTATGGCCGTCCCCATATACCATCTTATGCACCTCCATACATCAGCAACAGTGCTAGGGGTCCTGTGATCAGGACACCGCGATGGTCAACTGGTCTTTGTCGTTGTCTTGATGATCCTGGAAACTGTTTGGTTACTTGCTTCTGCCCTTGTGTTACATTCGGATTGATAGCAGAAATAATAGATAAAGGCAATAGAACTTGCACTTGTAATGGGGCTATTTATGCGACACTGCTATCTCTGAGCGGGCTTGCATGCTTGTACTCATGCTACTATAGGTCCAAAATGAGGGCACAATATGATTTGCCGGAGGCTCCATGTATGGATTGCTTAGTTCATTTCTGTTGTGAAACCTGTGCTCTATGTCAGGAGTATAGAGAACTTAAAAACCGTGGATTTGATTTGAGCATAGGTAATGCTATCTTTAACTTTGGCTAA 525 0.4305 MYPAVDEHDEAYEVHHNHPSYIVPVVVPPTYGRPHIPSYAPPYISNSARGPVIRTPRWSTGLCRCLDDPGNCLVTCFCPCVTFGLIAEIIDKGNRTCTCNGAIYATLLSLSGLACLYSCYYRSKMRAQYDLPEAPCMDCLVHFCCETCALCQEYRELKNRGFDLSIGNAIFNFG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01184 174 Pfam PLAC8 family 58 156 IPR006461 -
Vimu11g01184 174 PANTHER DUF614 FAMILY PROTEIN-RELATED 57 166 IPR006461 -
Vimu11g01184 174 NCBIfam uncharacterized Cys-rich domain 57 159 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01184 Vimu-Chr11 12831756 12832497 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01184 - K10875 gmx:100818282 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01184 11 12831756 12832497 Vimu11g01184 11 12831756 12832497 ECH