Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00876 ATGGGGTTTCACAGTGTTGAAACCCCACGAGAGGACGTGCCTCTTCTCTCCGATGCACCCCGTCTCTCCTCAACATTCAAGACCTTCGCCAACATCTTCATATCCATTGTGGGTTCTGGGGTGCTTGGTCTCCCTTACAGCTTCAAGAAAACGGGTTGGGTCACGGGTTTGCTCATGCTCTTCCTCGTCGCCTTCCTCACTTACCACTGCATGATGCTCCTCGTGCGCACTCGCCGCAAGCTTCAATCCAAGGAGGAGTTCCCCCATCTCAACTCTTTTGGTGATTTGGGATATGCCATTGGGGGCCCTCCTGGCAAATTTTTCGTTGATGTCATGATAGGGTTTTCTCATTGCGGTTTCTGCGTCGGCTACCTTATTTTCATTTCCACCACGTTGGCCAATCTCGCCGGTGACGCGTCAACATGGCATCCTTTTCTGGGTTTGACGCCAAAGGTCTTGTTTCTGTGGGGTTGCTTTCCCTTTCAGTTGGGCCTTAATGCTATCCCAAGTTTGACCCTTTTGGCTCCCTTGAGCATATTCGCCGATGTTGTTGATATTGCAGCGAAGAGTGTGGTGATGGTGGACGAAGTGTTCGTGTTCATGAAGAATAGGCCTCCTTTGGAGGCCTTCGGGGGTTGGTCGGTGTTTTTCTACGGTTTAGGGGTGGCAGTGTATGCATTTGAAGGGATAGGAATGATTTTGCCGCTGGAATCAGAGGCGAAAGATAAGGAGAAATTTGGTGGGGTTTTGGGTGCGGCTATGTTTGTGATTTCTCTGTTGTTTGCAGCGTTTGCTGGTTTAGGTTACTTTGCTTTTGGTGAAGAAACTGAAGGGGTTATCACTACGAATCTTGGACCAGGCATGATAAGTGCTTTGGTACAGCTGGGTCTTTGCATCAATCTGTTCTTTACTTTCCCATTGATGATGAATCCAGTGAACGAGTTGGTGGAGAGACGGTTGTGTGATTCTAAGTATTGTTTGTGGTTGAGGTGGTTGTTGGTGTTGGGGGTGAGTTTGGTGGCAATTTTTGTGCCTAACTTTGCAGATTTTTTATCACTTGTTGGTAGTAGCGTCTGTGTTATTCTTAGCTTTGTGTTGCCAGCTACGTTTCACTATTTGGTTTTCAAAGAAGAGATTGATTGGAAGTGTCTGGTTTCTGATGGGGCAATTGTCGTTTTTGGGTTGGTTATTGCTGTTACAGGAACCTGGTCTTCCTTGTTGAACATGCTTTGCCACACTGCTTGA 1245 0.4739 MGFHSVETPREDVPLLSDAPRLSSTFKTFANIFISIVGSGVLGLPYSFKKTGWVTGLLMLFLVAFLTYHCMMLLVRTRRKLQSKEEFPHLNSFGDLGYAIGGPPGKFFVDVMIGFSHCGFCVGYLIFISTTLANLAGDASTWHPFLGLTPKVLFLWGCFPFQLGLNAIPSLTLLAPLSIFADVVDIAAKSVVMVDEVFVFMKNRPPLEAFGGWSVFFYGLGVAVYAFEGIGMILPLESEAKDKEKFGGVLGAAMFVISLLFAAFAGLGYFAFGEETEGVITTNLGPGMISALVQLGLCINLFFTFPLMMNPVNELVERRLCDSKYCLWLRWLLVLGVSLVAIFVPNFADFLSLVGSSVCVILSFVLPATFHYLVFKEEIDWKCLVSDGAIVVFGLVIAVTGTWSSLLNMLCHTA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00876 414 PANTHER AMINO ACID TRANSPORTER 23 401 - -
Vimu11g00876 414 Pfam Transmembrane amino acid transporter protein 23 405 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00876 Vimu-Chr11 9027236 9028480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00876 10 406 Organic Solute Cotransporters AT4G38250 62.500 8.00e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00876 K14209 - gmx:100791548 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00876 11 9027236 9028480 Vimu11g00876 11 9027236 9028480 ECH