Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00831 ATGTCCGACACAACCACCTCACGCTTTTATACGCCGTTAATCGTTATCGTTCTCCCTGTGGCTGTGGCTGCGATTCTCTTCCGGCTTGAACCCTTCGAACCGGCTTTGTTGCCGGTTCAGCTGGGCCAGTCCGTCGTGGTGGTTCCAGCACGTAACGACCACGCGCGAGTTGGATCTGAAGCTGTGGGCGAGGGACAAGTTGAGGGCCCCGAAGACTTGGCGTACGACGCCGCATCACGTGTTGTCTACACTGGGTGTGAGGATGGGTGGATCAAGCGAATCACCGTGAACGACTCGGCTGTTGAGTCGGTAGTTGAAAGTTGGGTCAACACGGGAGGAAGGCCACTTGGGCTAACTTTGCTACACAACGGTGAACTCATCGTTGCTGACGCGGGAAAGGGATTGCTGAGAGTGTCAAGTGAAAAGGAGGTTGAGCTGCTGGTAGATGAGTATGAGGGCCTAAAATTCAAGTTAACAGATGGTGTTGATGTAGCAGAAGATGGTACTATTTATTTCACAGATGCATCACACAAATACCATATGAATGGTTCTGTCTTCGACTTGTTGGAAGGGAAGCCTAATGGCAGATTCTTCAGCTATAATCCAGCAACAAAGAAGACAACCCTGCTTGCCCAAGACCTTTACTTTGCCAATGGTGTTGCAGTTTCACCTGATCAACAATTTGTGGTCTTTTGTGAATCTCCCCTGATGAAATGCAATAAATATTACTTAAAGGGGCCAAAAAAGGGAACCATAGAGAAGTTTTGTGACCTACCTGGCATGCCTGATAACATTCATTATGATGGAGAAGGGCATTACTTGATTGCAATGTTCACGGCCCTTACTCCTGAACTGAATTTGGCATTCAGATATCCTTTCATTAGGAAGGTTGTAGCAATTGTAACAAAATATGCGTGGAATTTTCCTATCACCAAGAATGGAGGATTTGCAATCGTCGATTTAGACGGAAAACTAACTGCACATTATTATGATCCCAAGCTAGGATTGACCAGTGCGATTAAAATCGGGAATCATATATATGCTGGATCCATTTTTTACCCATTTGTAACACGTTTTGATATTGAGAAATATCCTGCTCTCCCCACAGTTTGA 1113 0.4582 MSDTTTSRFYTPLIVIVLPVAVAAILFRLEPFEPALLPVQLGQSVVVVPARNDHARVGSEAVGEGQVEGPEDLAYDAASRVVYTGCEDGWIKRITVNDSAVESVVESWVNTGGRPLGLTLLHNGELIVADAGKGLLRVSSEKEVELLVDEYEGLKFKLTDGVDVAEDGTIYFTDASHKYHMNGSVFDLLEGKPNGRFFSYNPATKKTTLLAQDLYFANGVAVSPDQQFVVFCESPLMKCNKYYLKGPKKGTIEKFCDLPGMPDNIHYDGEGHYLIAMFTALTPELNLAFRYPFIRKVVAIVTKYAWNFPITKNGGFAIVDLDGKLTAHYYDPKLGLTSAIKIGNHIYAGSIFYPFVTRFDIEKYPALPTV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00831 370 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 6 56 363 - -
Vimu11g00831 370 Gene3D - 54 307 IPR011042 -
Vimu11g00831 370 PANTHER STRICTOSIDINE SYNTHASE-RELATED 20 351 - -
Vimu11g00831 370 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Vimu11g00831 370 Pfam Strictosidine synthase-like, N-terminal 59 94 - -
Vimu11g00831 370 SUPERFAMILY Calcium-dependent phosphotriesterase 59 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00831 Vimu-Chr11 8615729 8618370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00831 - - gmx:100813217 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00831 11 8615729 8618370 Vimu11g00831 11 8615729 8618370 ECH