Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00769 ATGTCAAAGAGAAACTGCGTCGTTATTCTGTCATCGGAAGATGAAGACGCTACTTCTAACCTTCGCTCGTTGAGTTCCAGTCGCAGCTATACGAAATCGAAGTCGAGGTCCACCTCATCATCCTCTCGGGGAAGAAAGAAGGCACGTGCTTCGCATTCTCGCTCTCACCTCTCCAAATTGCACGAGATAGACTTATTTGGAGATGACTTCAATGAAGTGTTTACTGGGTCAAAGGTATCCGCTGTTAAAACTTCACCTTATTCTCTAAATGTGCTCCTCGCTTTGAAGGATGCAAGTTGTAGTATCACAGTGTGCTACGTGGATACAACAGGTACTCAAAGGAGCTTTGCGGAGGAGTTATGGGTTGATAAATACAAGCCCAATTCACTAGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGATGTTAAGACGTGGTTTGAAGAGAGGTTGAAATCTTCAAAGGGTGTCTACAATAATAATGTTCTCCTCATCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTGATTGCATCTCATCTGGGAGCAATAGTTGATGGGTGGAACACACCTACACCTGTAATATGGCGGGAGCATCTTTATAATTCTGGCACAGGGACTCAATACACATCCAAGTTAGATGAATTTGAAAGTTTCGTTGAGAGAGTGCGAAAGTATGGATCATTGCTAACTTCTTATACTGGGGATTCAAAGCCTTCCATCATACTTTTAATAGACGATCTTCCCATGACTAATGGGAAATCTGCTTTTGGAAGACTTAAAAATTGCTTGCAACTTTTGGTAAAATCAACTCAGATACCCACAGCAATATTGTTAACTGACTGTGGAAATGCTGACTCAGTAGATTATAATGCTCGTTGCCTGGAAGAACTGAAGCTATCTCTGGAGAGTTCTGGGGCTTGTAAGGTTGCTTTCAATCCAATTACAGTGAATTCTATGAAGAAGGTTCTTTTCAGAATATGCCAAATGGAGCGGCGAGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAAACAAGTGGAGGTGACATCAGACATGCAATCACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTAGTGCATTCTTTGGCCTCTTCCACTTGCTCTCATGGTTCGTTGAAAGAGGAAAATAATAAACCTGATAGATCAGATTATGGATATTCATTGCACTTTGGCAGAGACGAAGCATTATCTCTATTTCATGCTTTGGGGAAATTTTTGCATAATAAAAGGGAGACTGGAGTTGGAATAGAATATGATCAAGATGGATTTCTTCTTCGAGAAAGACTTTCAAGATTACCATTAAAAATGGATGTCCCTGAGAAGATTCTTTGCCAAGCCCATGTGCAACCTGGTTCAGTTGCTGATTTTCTGCATGAAAATGTTCTGGATTTTTTGGATGACGAGGCCATAGATGACGCATGGACCGTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCAAAACTCCGGGGAATGCTATGTAGTTATAACGAGGCAGAGGGTGTTTTACAGTCAGCTGCTGCATCCATAGCTGTTCGTGGGGTGCTATTTGGAAATTCTAATCCGCTATCCTCCAGGTGGCATGCAGTTCGGCGACCAAGGCTCTGGCAAGTTGAGAAAGTATCATTATATAAGAATGAGGTGGATAGGCTGAGAATCCCTGCCTGTAAGCGGTTTAGTTCTTATCATATGTCAATTATGGCCACTGAGTACATGCCCATGCTTAAATTGCTCGGAAATAGAGCATGCGGATATGATGGACCGAGTCAGAAATCATCATTGAACTTGGAAATGGAAGACTTTGATTTCCACAAAATGGATTTAGATGAACAATCTATGGGCCTTTCCGATGATGACATAGAAGATTGGTAG 1911 0.4165 MSKRNCVVILSSEDEDATSNLRSLSSSRSYTKSKSRSTSSSSRGRKKARASHSRSHLSKLHEIDLFGDDFNEVFTGSKVSAVKTSPYSLNVLLALKDASCSITVCYVDTTGTQRSFAEELWVDKYKPNSLEELAVHKKKVEDVKTWFEERLKSSKGVYNNNVLLISGQAGVGKSAAIHVIASHLGAIVDGWNTPTPVIWREHLYNSGTGTQYTSKLDEFESFVERVRKYGSLLTSYTGDSKPSIILLIDDLPMTNGKSAFGRLKNCLQLLVKSTQIPTAILLTDCGNADSVDYNARCLEELKLSLESSGACKVAFNPITVNSMKKVLFRICQMERRDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPNLVHSLASSTCSHGSLKEENNKPDRSDYGYSLHFGRDEALSLFHALGKFLHNKRETGVGIEYDQDGFLLRERLSRLPLKMDVPEKILCQAHVQPGSVADFLHENVLDFLDDEAIDDAWTVSSYLGDADILLAKLRGMLCSYNEAEGVLQSAAASIAVRGVLFGNSNPLSSRWHAVRRPRLWQVEKVSLYKNEVDRLRIPACKRFSSYHMSIMATEYMPMLKLLGNRACGYDGPSQKSSLNLEMEDFDFHKMDLDEQSMGLSDDDIEDW 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00769 636 MobiDBLite consensus disorder prediction 39 54 - -
Vimu11g00769 636 MobiDBLite consensus disorder prediction 13 38 - -
Vimu11g00769 636 Gene3D - 319 390 - -
Vimu11g00769 636 MobiDBLite consensus disorder prediction 13 55 - -
Vimu11g00769 636 CDD HLD_clamp_RFC 318 363 - -
Vimu11g00769 636 FunFam RAD17 checkpoint clamp loader component 118 299 - -
Vimu11g00769 636 Pfam Rad17 P-loop domain 118 290 - -
Vimu11g00769 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 367 IPR027417 -
Vimu11g00769 636 Gene3D - 118 299 IPR027417 -
Vimu11g00769 636 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 39 633 IPR004582 GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00769 K06662 - gmx:100799826 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00769 11 8044474 8050380 Vimu11g00769 11 8044474 8050380 ECH