Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00719 ATGGCAGTTCCAGAGATGAACCATAACCATTCGTATCATCATCATAAAGTCTTCTCAGTGTTAATTGTCCTATTCCTCCTCCTCGTCGACAATGCTCTCTGCATCAGGTTTCCCGATCGAGTCTCCCAATCCGCCCTCGACCAATCCGACCAAGAGCGCTTGCAGGTGGCTGTCTTCGCCCTTGGCAGCTTCTGGCGATCTGAAGCCGTCTTCGGCTGCTTGCCCGGCGTTGTACGCACTACCGTCGGCTACGCCGGCGGATCCAAGTCCAACCCCGAATATCGAAGCTTGGGTGACCATGCCGAATCCGTCAAGGTTGAGTATGATCCACAGCTGATTACTTTTAGGGAACTATTGGATATCTTTTGGTCGAGCCATGATCCTAGGCAAGTGTATGGCCAAGGTAGGAGAAATCCTGATCTCAACCACCATTTCTGTGATCCTCCCCATATTCAGCGTCTTGCTGAGTGTTATATACTTAACAAAAACTTGTATTCTTGCAGATCTATTATTTTTGTCAATGGAACTGAAGAAGGAAGAATGGCTGCTGTCAGCAAAGAGCAGGAGCAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCTACAACTTGGAACATTTTACCCTGCAGAGTCAGAGCACCAGGTAAAGATGAGGAAATTTAAGGGGTGGATGACATGGAAGAAAGTAAAGAAGCATTACCAACTATGTGATCAGAAGCGCCTCAAGATCATGGTACTCCTTTTTAGTAGAGGAAAAATGGAGGTGAGAACAGATAAGGAACTAGACTACGCCAACAAACATTTCTGGGCAGATGCACTGGTGTTCCAACAACGGGATGGCAGTGTGTGGCTTCACACATCAAACAGGACACCTGAAGAACCAAACAACCCTAATCTCATTGGTGATATCCTGATTGCAGACGGAGCACAGATGGTGAACGGAAGAGACAGCAGGATGGTACCTAAATTTGAACTCAAGCAAAATACCATTCTTCTTCAGTTAATTGGCAACCTTCCTGCCGAGGAGCTTGAGAGGTCTAGCCTGGCAACGAAATTGAATGGATATGTAGCAGAGCTTTGCCCTCCAGATATCCAAAAGCGTATTGATGCCAAGATCAATGATATTATTAAAAGGGGTTGGCCAATTTTGAGAGATTTGTAG 1167 0.4602 MAVPEMNHNHSYHHHKVFSVLIVLFLLLVDNALCIRFPDRVSQSALDQSDQERLQVAVFALGSFWRSEAVFGCLPGVVRTTVGYAGGSKSNPEYRSLGDHAESVKVEYDPQLITFRELLDIFWSSHDPRQVYGQGRRNPDLNHHFCDPPHIQRLAECYILNKNLYSCRSIIFVNGTEEGRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAESEHQVKMRKFKGWMTWKKVKKHYQLCDQKRLKIMVLLFSRGKMEVRTDKELDYANKHFWADALVFQQRDGSVWLHTSNRTPEEPNNPNLIGDILIADGAQMVNGRDSRMVPKFELKQNTILLQLIGNLPAEELERSSLATKLNGYVAELCPPDIQKRIDAKINDIIKRGWPILRDL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00719 388 Pfam Peptide methionine sulfoxide reductase 57 136 IPR002569 GO:0008113
Vimu11g00719 388 Pfam Peptide methionine sulfoxide reductase 168 221 IPR002569 GO:0008113
Vimu11g00719 388 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 47 223 - -
Vimu11g00719 388 SUPERFAMILY Peptide methionine sulfoxide reductase 47 135 IPR036509 GO:0008113
Vimu11g00719 388 Gene3D Peptide methionine sulphoxide reductase MsrA 49 279 IPR036509 GO:0008113
Vimu11g00719 388 SUPERFAMILY Peptide methionine sulfoxide reductase 167 217 IPR036509 GO:0008113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00719 K07304 - gmx:100782739 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00719 11 7693420 7697181 Vimu11g00719 11 7693420 7697181 ECH