Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00697 ATGGCAGCCATAATGTTGCTTCTCATTTTCTCGTCTCTTACCTCAATTTCGGAGCCATGTCACGTGGTGGACAAAGAAGCATTACTAGAATTCAAGAGCAGGATCATCTCTGACCCTTCAAAACTGCTAGATTCCTGGACACCTTCATCTGACTGCTGCCACAGTTGGGAAGGCATCGCATGTGGTTCCACTGGCAGGGTCATCAACCTTACTAGAATCGGCGTCGTGTTCGACGTTGATGACATCCCTCTCGAAACCTACATGTCAGGAACGTTGTCACCTTATCTTGGAAACTTGTCTGCTTTGCAAGTTTTGGACCTTAGCAATCTCAAGCAGTTGCATGGTCCAATACCATCAGAACTCGCCAAGCTATCCCACTTGACTAAACTTTTTCTCTATTCAAACCAGCTCTCAGGTGGGCTACCCGCGTCTTTTGAAAACCTTTCACGGCTTCAGAGTTTGTACCTCGATAACAACCAATTGTTTGGTAATGTTCCTTTTTCTGTCTTTGCCTCCTTCAACTCTCTTTTAGAACTTGGTCTATCTGGAAACAGGCTTTCTGGGGCTATTCCTTCTTCCGTTGGAAGAATGGTATTTCTCACTAGGCTTCACCTTCATCAAAACAATTTTCATGGAATCATTCCTTCTAGCATTGGAAATCTTGTAAACCTCAAGGACTTGGATTTCTCTTTTAATCAGATTAGTGGAAGAATCCCAGAGTCAATCGGGAGACTTTCACAATTGGTTTTTCTGGACCTCATGCATAATAATCTCTCAGGAAACCTCCCTTTTTCTATTGGGGATTTAAGTTCTCTGAAGTTTTGCAGTTTAGCAGCGAACAAGCTAACAGGCGTTTTGCCTTATTCCATTGGAAAACTCGGCAATGTGCGTAGGGTAATCCTTGAGAACAATAAACTCACTGGGATGTTACCTTCCACCATTGGCCGTCTAGCTAGTTTAACTGATTTATTTCTCGCAAACAATGAATTCAGTGGCAAAATTCCACCTTCCTTTGGCAATTTAGTCAACCTGCAAACACTGGATTTCTCAAGCAACCAGTTTTCTGGTCTACTTCCCCCTCAACTTGCTAAACTACAGAGTTTGCAAACTTTAGACTTGTCATTCAACCCATTAGGACTAGCCAAAGTACCCAAGTGGATATCCAAGTTAAGAGTTTTTCAGTTGAAATTAGCCCAGACAGGGATCAATGGTCAACTTCCAAAGTGGCTTGCATATTCATCAGTGACAACCCTTGATTTGTCAAGCAATGCATTGACGGGGAAATTGCCATGGTGGATTGGAAACATGACTCGCCTTTCCTTCCTGAACCTGTCAAACAACCAGTTTCATTCGTCAATCCCAGTGGCATTCATGGGCCTTTCTTCTCTGATGGACCTTGACCTCCATTCCAATAAGCTCACAGGATCCCTCAGAGCGGTGTTTGAGAAAGAGGTTCAATTTTCACTAGGCCATTTCAACTCTGTCGACCTATCTAACAACAAGTTTTGCGGTCCCATTGACGACAACATTGGACAAAAGGCCTCAATGAGTTCAATCAAATCTCTTGCATTGTCACACAACCCGTTGGGAGGATCTATACCAAAGTCAATTGGGAAACTGAGAGAATTGGAGATTCTGGACCTTGAAGACAGTGGACTCTCAGGGAATATACCTGAAGAGCTTGGTGATGCCGAAACGTTAACAAAGATTAATCTTTCAAAGAACAAATTAAGTGGCAACATACCAGAGAAGGTCCTAAATTTGAAGAAACTTGAAGAGTTCGATGTGTCAAGAAACAGACTCAGAGGGAGGATCCCTCCACATAAGGCCATGTTTCCTATTTCAGCTTTTGTGGGTAATCGAGGATTGTGTGGACCACCTCTTCCTCCTTGTAAACTTCGTTATAGATAA 1911 0.4296 MAAIMLLLIFSSLTSISEPCHVVDKEALLEFKSRIISDPSKLLDSWTPSSDCCHSWEGIACGSTGRVINLTRIGVVFDVDDIPLETYMSGTLSPYLGNLSALQVLDLSNLKQLHGPIPSELAKLSHLTKLFLYSNQLSGGLPASFENLSRLQSLYLDNNQLFGNVPFSVFASFNSLLELGLSGNRLSGAIPSSVGRMVFLTRLHLHQNNFHGIIPSSIGNLVNLKDLDFSFNQISGRIPESIGRLSQLVFLDLMHNNLSGNLPFSIGDLSSLKFCSLAANKLTGVLPYSIGKLGNVRRVILENNKLTGMLPSTIGRLASLTDLFLANNEFSGKIPPSFGNLVNLQTLDFSSNQFSGLLPPQLAKLQSLQTLDLSFNPLGLAKVPKWISKLRVFQLKLAQTGINGQLPKWLAYSSVTTLDLSSNALTGKLPWWIGNMTRLSFLNLSNNQFHSSIPVAFMGLSSLMDLDLHSNKLTGSLRAVFEKEVQFSLGHFNSVDLSNNKFCGPIDDNIGQKASMSSIKSLALSHNPLGGSIPKSIGKLRELEILDLEDSGLSGNIPEELGDAETLTKINLSKNKLSGNIPEKVLNLKKLEEFDVSRNRLRGRIPPHKAMFPISAFVGNRGLCGPPLPPCKLRYR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00697 636 FunFam MDIS1-interacting receptor like kinase 2 isoform A 238 337 - -
Vimu11g00697 636 Gene3D Ribonuclease Inhibitor 22 192 IPR032675 -
Vimu11g00697 636 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 5 506 - -
Vimu11g00697 636 SMART LRR_typ_2 588 619 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 516 540 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 293 316 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 124 147 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 460 483 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 221 245 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 197 220 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 317 340 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 341 364 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 365 390 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 148 172 IPR003591 -
Vimu11g00697 636 SMART LRR_typ_2 436 459 IPR003591 -
Vimu11g00697 636 SUPERFAMILY L domain-like 395 631 - -
Vimu11g00697 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Vimu11g00697 636 SMART LRR_sd22_2 588 616 - -
Vimu11g00697 636 SMART LRR_sd22_2 221 247 - -
Vimu11g00697 636 SMART LRR_sd22_2 341 359 - -
Vimu11g00697 636 SMART LRR_sd22_2 365 382 - -
Vimu11g00697 636 SMART LRR_sd22_2 124 150 - -
Vimu11g00697 636 Pfam Leucine rich repeat 200 258 IPR001611 GO:0005515
Vimu11g00697 636 Pfam Leucine rich repeat 337 378 IPR001611 GO:0005515
Vimu11g00697 636 Pfam Leucine rich repeat 414 473 IPR001611 GO:0005515
Vimu11g00697 636 SUPERFAMILY L domain-like 33 379 - -
Vimu11g00697 636 Gene3D Ribonuclease Inhibitor 285 382 IPR032675 -
Vimu11g00697 636 Gene3D Ribonuclease Inhibitor 193 284 IPR032675 -
Vimu11g00697 636 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 357 634 - -
Vimu11g00697 636 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 118 214 - -
Vimu11g00697 636 Gene3D Ribonuclease Inhibitor 383 634 IPR032675 -
Vimu11g00697 636 PRINTS Leucine-rich repeat signature 344 357 - -
Vimu11g00697 636 PRINTS Leucine-rich repeat signature 365 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00697 Vimu-Chr11 7467757 7469667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00697 51 636 Receptor kinase-like Gene Family AT5G46330 33.904 4.13e-74 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00697 - - gmx:102664464 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00697 11 7467757 7469667 Vimu11g00697 11 7467757 7469667 ECH