Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00694 ATGGACCCTTTGGAGGTTCAACCTCCTTGGGTTCCCCAAGATGACCTTCTCCTCAAGAACGCTGTTGAGGCTGGTGCTTCGCTGGAATCGCTGGCAAGAGGAGCTGTTCGGTTCTCGCGGCGGTACTCCTTTAGGGAATTGCAAGATCGCTGGCTGTCTCTGCTCTATGACGGGGATGTTTCCACCAAGGCGGCTCTTGCCATGAGGAATTTGGAGCTGGCCAAGTCAGCTGCTGCCGGTGGTGAAGGAAGTGGTGCTAGTGGTGGGGAGAAGAGGAAATTTCAAAACAGTGGTGGTGTTGGGAAAAAGATGAAATTTCAAAGCGTTCGCAAACAGTACTGCAGCATGCAGAAAAAACTTCGCCGGCACCGCAGTGGCGTCATGTCTTCCGAGGTAAAGAACGAGGTGGTGGGGTGTGAGGGAAAAGAGAATGTGGTGGTTGACGGTAATTTTAATAGTGATTTTGTGAATAGTAGTGTAGTTGGTTATGGGAATTGCTTGGGGTCAGACGGGGTAGAGGTGGGGCAATTGGGTGATTTGGTGAGTGATATACCTGTGTGGAAAACGATTGAGGATGTTTGTTTGCCTGATTTGCCTGTTCATGTTAGTGTGGAGGGTAAAAGTTGTGTTTCTGAAGGGGGAGTGGATTTGAAAGATGAGTGCGGGAATGGTGGGTTGAAATTGAATGCTCCTGATGCCAAAAGTCTCTCGAACTTGGCAAATGAGGATGAACTTCTCTTTATGAATGTAGAGGGGAAGGAGGTAATGGCTATGGATAAGAATAATGATAAGCCGTGTTATGATAATGTTGATTCACTTCCGTTGAGTTCTTCCGCTGATGTTCCTGTATTGCAGAAGTTGGATGTGGAAACAAAACTTTCTGTGCCTGGTGGGTGTGTTTCTGATGGGCAGGGAATTGCAGCTAATCCATTAGGTTCCAGTTGTGGTGATCAGCTTTTCGATTCTGATCCCAGAAACAATGCTGCATTGTCAGCTGCAGCACAAAGTCCTCGCTCTGAACACAGTGAGGGATTTATGATCTGTGTGTTGAATACTGAGCACCCTGATATCCCATGCAATGTTAATTTGGATGTGTCCGTCGTAATTCCTGAATTAGCAGCTCTAAAATCCCAACCAGTTGTTAAAGAGGCGGGTTTTTCGGAATCTGCTATTAGTAATCAAAGAAGAAATGGACCAGATGGAAGCCTGAAGAAAGAAGCCGTTCTTTCTCAGTCTTTTGCTTCAAAAAATTCAAGCTACAAACCTGTTGTGTTTGGACTGAAAAGTGAAAATCCTGGAAGAAACGCAATCACTGCAGTTTCTAGACAGAATAACAATGTTGATGTCAACCCAAGTCATGGCAGATCAGTTCGTGCAAGTGTGAAGCCTGCCTTAGATGGACATCTGAAACAAGAGGAAAATTTCACTGAAGGTGTATCACATAAACAGGATATTGACGATCCAGCTGCTGCACATGTTAAGGCTGAGGAACATAAAGCTTTATCAAAATCAGAAGCAAAATCATTATCTCTTGATCAGGAAGGAGGTGATATTGAAGACGATGGTGAAGACGAATATGATGATTATTGTGGTGATGAACTTCCTTACTTTTCTGATGTTGAGACAATGATTCTTGAAATGGATTTATCTCCAATGGATCAAGATCCAAACGCAAGGAGAGAAGTATTGAGATATCAACATGAAGAAAGCAGGAAGACCATCATGAGATTGGAGCAAGGTGCTCAGTCCTCTATGGGAAGAGCCATTAGATCTCAGGGCGCACTTGCAGTAGTGTATGGGCGAATTCTGAAGGAATATATTAGAAAAAGCAAGGTTGTACTTGGCAGAGCAACTAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGTGGCTACAAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGACGCAGATGGTTCTTTCATAATTAAAAATCTTGGCAAGAGATCTATCTTCTTGAATGGCAAAGAAATTGCTACAGGACAAGCGCGAGGTCTTGGTGCTAGTAGTGTGATCGAGATTAGAGGCATTTCACTCATCTTTGAGACCAATAATAGGTGCGTGAAGAGGTTTTTAGAAAATGTGAATGAGAAGGTATGA 2136 0.4373 MDPLEVQPPWVPQDDLLLKNAVEAGASLESLARGAVRFSRRYSFRELQDRWLSLLYDGDVSTKAALAMRNLELAKSAAAGGEGSGASGGEKRKFQNSGGVGKKMKFQSVRKQYCSMQKKLRRHRSGVMSSEVKNEVVGCEGKENVVVDGNFNSDFVNSSVVGYGNCLGSDGVEVGQLGDLVSDIPVWKTIEDVCLPDLPVHVSVEGKSCVSEGGVDLKDECGNGGLKLNAPDAKSLSNLANEDELLFMNVEGKEVMAMDKNNDKPCYDNVDSLPLSSSADVPVLQKLDVETKLSVPGGCVSDGQGIAANPLGSSCGDQLFDSDPRNNAALSAAAQSPRSEHSEGFMICVLNTEHPDIPCNVNLDVSVVIPELAALKSQPVVKEAGFSESAISNQRRNGPDGSLKKEAVLSQSFASKNSSYKPVVFGLKSENPGRNAITAVSRQNNNVDVNPSHGRSVRASVKPALDGHLKQEENFTEGVSHKQDIDDPAAAHVKAEEHKALSKSEAKSLSLDQEGGDIEDDGEDEYDDYCGDELPYFSDVETMILEMDLSPMDQDPNARREVLRYQHEESRKTIMRLEQGAQSSMGRAIRSQGALAVVYGRILKEYIRKSKVVLGRATNDVHVDIDLGKEGEEVATKISRRQALIKLDADGSFIIKNLGKRSIFLNGKEIATGQARGLGASSVIEIRGISLIFETNNRCVKRFLENVNEKV 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00694 711 SUPERFAMILY SMAD/FHA domain 604 694 IPR008984 GO:0005515
Vimu11g00694 711 CDD FHA_MCRS1 591 696 - -
Vimu11g00694 711 MobiDBLite consensus disorder prediction 79 99 - -
Vimu11g00694 711 PANTHER MICROSPHERULE PROTEIN 1 8 710 IPR037912 GO:0002151|GO:0031011|GO:0071339
Vimu11g00694 711 ProSiteProfiles Forkhead-associated (FHA) domain profile. 612 670 IPR000253 GO:0005515
Vimu11g00694 711 SMART FHA_2 611 670 IPR000253 GO:0005515
Vimu11g00694 711 MobiDBLite consensus disorder prediction 489 514 - -
Vimu11g00694 711 Gene3D - 554 707 - -
Vimu11g00694 711 MobiDBLite consensus disorder prediction 489 525 - -
Vimu11g00694 711 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00694 Vimu-Chr11 7441759 7445818 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00694 - - vra:106769492 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00694 11 7441759 7445818 Vimu11g00694 11 7441759 7445818 ECH