Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00650 ATGGAAAGCTTGGCGCATTCTCGCCAACCAAACAAGTTTCCCATCACAGTTTCCAAGAAAATCACCGCAGCCTCAGGAGGCGCTGCTTTTCCGGTCGAAACTCTATACCACCACGTATACGGCGGCGCGACGAGGTTCGCCGGCGGCCACTCCCTCTCGCCACGCTTCGAGGACTACGGTGAGATTTTCTCCAGCTTCCACGCGCCCCGCGCCTCCGCCATTCCGGTGCTGGATCTTCCGTCGCTCGACGATGGCGAGGTCTTCTTCGACTTCCGAAACGTGGCGTGCGACTACGCCGAAATTTTCCGAGGCTTCGACGGCCTCGATTTTTGGCTCTCGTACGAGGACTTGTTTCGCGACAGTGTCTCCGAAGAAGACGACGGTGATGATGCTCAAAAGAAAGAAGCCTGGACGCCGGTGGAAACTGATTCATTTTCCGGAGACTTGGACCATTTTGGATTTAATGAAGGCATGCCAAATGATGATCATTTCCGGTCTCGTGATGGAATTACAGAGTTCAACGTTTTGTATCATAAGGTAAATGGTACAGGCAATGAAGATATGTCAAAGAGGAAAAGTACTGTAAGTCAAATGCGTGCTGCTCCTGAATTCACTCAAGTATTTGATGAAACCACGCACTTCCATAGGACAGATCCTTCCTTGCAAGTTGTTGATGATGTTGACCTCGATATGGAATTTAATGCAAGCCAGGCAAGGAGAAACCATAGAGAAATGGTGTCACATCCGGTTAATTTTACATCTGGTGAACAGGTTTTTGGTAGCGATCTTGATCTGCACAATGGATGCTGCAAGAATGGTTCTCATTCCAGTGAAACATTCATAACTGTGTCTCACATTAGCCTCAGAACTCTACCCTCTCAAGTGCCGCCCCCTTCTCGGCCACCACCTGTATTGGATGCAAAACAGGAGTACGCAGGTGGTTTTCATTCAAACAAAGAGGGGTTTGACATTGAAGAGACTCTTGGTGATACTTCGCCACCTTTCCTTGATGTGGAGGTTGATACAAATTCATCCGCTGCTGCTATCAAAGAAGTCATGCATAGACCTGAAGCAAAACTTAGGAGTAACAAGGAATTGAAAGAGAGAAAGAAGAGGTTTTCCGAAAGCAATGCATATTCAAGTTATGATGTAAAGGTTAATGAAGCAAAGACAAGTGTGAATATAACTACATTTGATAGTTTGAATGATAAGGGTGTGCAGAGAATTGGCCAAAAGGAAATTTCTTTCAGAGATGAAAGGCAGAAAACTGGGAAGGCTGCCCCAGAAACTCTGGAATTGTTAGAAGGGGAAAGACTTCTAAACATGTTTGATGAAACGCACATCAAGGAGTCCAGATCACCTCAAGAATCAGATAGAAGTACTGGAATTGGGATGTGGAAAGAAGCAACTGAATTTTTTGAATTGGTGGGAACAGAAGAGCCTGGGAAGGTAACTACGCCCACAAAACATAGCCATACTAAGAAACTGGTTCAAGATACCAGAGCGCATGAGTGTGGCAAGGAAGAATGGGAAGCGTTTAACATTAAAGCAGAATACAAAAAGGTTAGAGAAGTTGAAGGTCCTGAGCGAGAGGAATGCAAGGAGAAATACAAAGTAGGAAATTGGGCTCATGAACAGAGAAAAACCATTAAAAAATCTAAGTTATCTGATGAGGAGTTCAGGCAGAGAGAGCATGTGAAGAACGAGGAAATGGCCGGAATATTTGGGCTAGAAAAGAGTGAGAAGGCAAGCGTGGTCACTCCACATGGAAAAACTGATAAGAAATTACCTAAAGCTGATCAACCAGGAAGCTTAAAAGACATGTTCGAGACTCTACGCAAGGAGCACAAACAAGTTGAGATTGAGAAATCAAAAGAGGTTGATAGAGAAATGCTCAGTGAAGTACAGTGGAAAATGAAGCGTATGGAAAGTGAGAAAAAACAAAAAGAGGATGAACAGCTACAACTGAGTATGAAAAGGCATAAACAGTCTCAGAGAATGAAAGAAAACGGAAAAATTCAAAGAGAAGCTTCTGCTCTTGGAGGTGTAGAGAGTGACCAACGGGTGAAAGATTCTGTGAAGCTAGAAAAGTTCGAAAGATCAAATGAAACCTGTAATCTGGATAGCCATAAGGAAAATATGTCTTGCAAAACAGAAGATGAAATTATCCTTGAAGCTGCACAGATTCACAACAAGAAGCAATTGAAGGAGGCATGTCAAAACGAAGTTGGGAAAAGCCGCAAAGATTCTTTTAAAATGGAAGAAAATGATGAATGCTTAAAGGATGCTCTTGAGAAGGTAAAGAACGAAAAGGGGCTTAAACAGGACTTTGAACTGGAAATGAACGAGAAAAGATCTGGAGTGACTTTTGAGCTAGGGGAAAATGAGCCTTGCCAAAGAGATCATGGTAAAGAGAAACTTAATGAAATTTGTGATGGGTATAGAAAAGGAAATAGACTAAAAGATGTAGATGATAGCATATGGCTTCAGAAAGTTCTGAAACAACCTCCGGAGCTACAAATGAATAGTGGAAATGAGACTCAGAGAAAGAAAGAAATCAACTGCCCATCAGACCTACCATGTGATAGCGAAGGAACTGTCGATAAATCACGTGAGGATAGTCACTCCCAAAAGCATGAGAGGATGCTCAAAGATGGTAATAAAGATGGAAAAGATAAGGGATTGGACAAAGCTTTGGAACAAACAGAAGGTAATGGGAAAGGGATTCACTTGAATGTTGCAAAAGAAACCAATGAGGAATGGAAAACAGAGAGTGATAACGATCTTTTGGCAGCTCACTCATTGTCCATTCATGAAGAAAATATTTGCATACAGGAGCTATGTCAAGACCCTATAGCTGACCAAGAAATTGGAAAGAGTGTCACTGCCTGCAAGGTTGGTGAAAAGAAATTGGAAGAAGTATGTTTGGAAAATCTGAAGGATACTGGTAAAAAAGGGGCTTTTGAAATGTCCCACGGAGAACTAGAGCATTCAGGAAAGGTGACTTGCACTAGTACAAATGTCAATGTCAACGACCATAGTTTTGACAGTGAACATGCATTCACAAAGGAAACTAAGACAGCCTCTCAAATGGAATTTGATGCACGGAATGAAGAGAGGACAATTGATGGATGGGGTGAGAGAGTAAAGACTAAACAACATGTGAATGTTTCACTAAACACTGAAGAGAGCCGGGACCGAATGTCATCAAGCCATGCTAACGTGTGTAGTGATTATGGAAGGAACACAGTAGCTGATGAAACTGCTACAGTACAAGAAGCGGTAAATATCAAGAAGCCTTCTGAAAGAGGTCATGTATCAAATTCCACCAAAAGCAAAGATAAAGGTCTTGATGAAACTTCTGCTTCAATAGAGAAATATGCTGATGAGAGGATAAGAAGAGAAAGAGAGTTGGAAGAAGATCGTTTGAGAAAGATAGAAGAAGACATGGAGAGAGAAAGGGAAAGACAGAAAGACAGAATGGCTGTTGACAGAGCAGTGCTGGAGGCTGAAAGGGAAAGGGAAAGGGAAAGAGGAAAGGATCGGATGGCAGTTGATAAAGCAACTTCGGAGGCTCGTGATAGAACATATGCTGAATCTCGGGAGAGAGCAGAAAGGGCTGCCTTTGAGAGAGCAACTGCGGAAGCTCGACAGAGAGTACTGGCTGAAGCCAGAGAGAGACTTGAAAAGGCATGCGCTGAGGCCAGGGACAAAACATATGCTGATAAGGCTGCTGCAGAAGCCAGATTGAAAGCACAGCGAACTGCCGTGGAAAGAGCAACCGTTGAGGCTCGAGAGCGTGCAATGGAAAAAGTAAAGGTTGAGAGAGCGGCATTTGAGTCCAGAGAACGATTAGGGAGGTCTGTCTCTGACAAGTTTAGTGTTTCTTCCAGAAACAGCGGAAGACAGGGCTCTTCGTCCTCAGATATGCTGGATCCATTTTGTCAGAACTCTAGTTCCTCCACTCATTCCAGATATCCGTACTCCTCGGTTTATGGTGCTTCCTCTTTTACTGAAAGATCAGAACGAGAAGGTGAATCAGCTCAGAGGTGTAGGGCTAGACTGGAGAGGTATCGCCGAACAGCTGAACGTGCAGCAAAAGCTTTGGAAGAAAAGAACATGCGCGATCTTGTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGATTAGCAGAAACCCTGGATATTGAAGTCAGGAGGTGGTCAAGTGGAAAAGAAGGAAATTTGCGTGCATTGCTTTCAACCTTGCAATATGTAGGTTTTTCATATTCTCAAATAGCCCTTATCACTCCTTTCTCCTCTTATTCTGAACTAATTTTTACTCAAGACATTCTTGGGCCTGATAGTGGGTGGCAACCAATCCCACTGACGGACGTTATAACTTCTGCTGCTGTCAAGAAAGCTTACAGGAAGGCCACCCTTTGTGTCCATCCCGACAAATTACAGCAGCGTGGAGCAAGTATTCAACACAAATACATATGTGAAAAAGTCTTTGATCTGCTAAAGGATAGCGATTCCAAGCCTTATCTTGATAATGAAATTGAAGCCACTTGTAGTGTCTCGATGAGGCATTTATCTTCTGCAGCCAGCATGACATAA 4596 0.4328 MESLAHSRQPNKFPITVSKKITAASGGAAFPVETLYHHVYGGATRFAGGHSLSPRFEDYGEIFSSFHAPRASAIPVLDLPSLDDGEVFFDFRNVACDYAEIFRGFDGLDFWLSYEDLFRDSVSEEDDGDDAQKKEAWTPVETDSFSGDLDHFGFNEGMPNDDHFRSRDGITEFNVLYHKVNGTGNEDMSKRKSTVSQMRAAPEFTQVFDETTHFHRTDPSLQVVDDVDLDMEFNASQARRNHREMVSHPVNFTSGEQVFGSDLDLHNGCCKNGSHSSETFITVSHISLRTLPSQVPPPSRPPPVLDAKQEYAGGFHSNKEGFDIEETLGDTSPPFLDVEVDTNSSAAAIKEVMHRPEAKLRSNKELKERKKRFSESNAYSSYDVKVNEAKTSVNITTFDSLNDKGVQRIGQKEISFRDERQKTGKAAPETLELLEGERLLNMFDETHIKESRSPQESDRSTGIGMWKEATEFFELVGTEEPGKVTTPTKHSHTKKLVQDTRAHECGKEEWEAFNIKAEYKKVREVEGPEREECKEKYKVGNWAHEQRKTIKKSKLSDEEFRQREHVKNEEMAGIFGLEKSEKASVVTPHGKTDKKLPKADQPGSLKDMFETLRKEHKQVEIEKSKEVDREMLSEVQWKMKRMESEKKQKEDEQLQLSMKRHKQSQRMKENGKIQREASALGGVESDQRVKDSVKLEKFERSNETCNLDSHKENMSCKTEDEIILEAAQIHNKKQLKEACQNEVGKSRKDSFKMEENDECLKDALEKVKNEKGLKQDFELEMNEKRSGVTFELGENEPCQRDHGKEKLNEICDGYRKGNRLKDVDDSIWLQKVLKQPPELQMNSGNETQRKKEINCPSDLPCDSEGTVDKSREDSHSQKHERMLKDGNKDGKDKGLDKALEQTEGNGKGIHLNVAKETNEEWKTESDNDLLAAHSLSIHEENICIQELCQDPIADQEIGKSVTACKVGEKKLEEVCLENLKDTGKKGAFEMSHGELEHSGKVTCTSTNVNVNDHSFDSEHAFTKETKTASQMEFDARNEERTIDGWGERVKTKQHVNVSLNTEESRDRMSSSHANVCSDYGRNTVADETATVQEAVNIKKPSERGHVSNSTKSKDKGLDETSASIEKYADERIRRERELEEDRLRKIEEDMERERERQKDRMAVDRAVLEAERERERERGKDRMAVDKATSEARDRTYAESRERAERAAFERATAEARQRVLAEARERLEKACAEARDKTYADKAAAEARLKAQRTAVERATVEARERAMEKVKVERAAFESRERLGRSVSDKFSVSSRNSGRQGSSSSDMLDPFCQNSSSSTHSRYPYSSVYGASSFTERSEREGESAQRCRARLERYRRTAERAAKALEEKNMRDLVAQKEQAERNRLAETLDIEVRRWSSGKEGNLRALLSTLQYVGFSYSQIALITPFSSYSELIFTQDILGPDSGWQPIPLTDVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKDSDSKPYLDNEIEATCSVSMRHLSSAASMT 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 584 605 - -
Vimu11g00650 1531 Coils Coil 1243 1263 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1290 1325 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 581 605 - -
Vimu11g00650 1531 SUPERFAMILY Chaperone J-domain 1331 1502 IPR036869 -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1098 1123 - -
Vimu11g00650 1531 Coils Coil 1129 1178 - -
Vimu11g00650 1531 Gene3D DnaJ domain 1361 1506 IPR036869 -
Vimu11g00650 1531 Coils Coil 632 659 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1171 1199 - -
Vimu11g00650 1531 Coils Coil 1348 1387 - -
Vimu11g00650 1531 Coils Coil 760 780 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1059 1079 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 864 895 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1094 1123 - -
Vimu11g00650 1531 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 15 1502 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 1289 1325 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 640 695 - -
Vimu11g00650 1531 Coils Coil 1211 1238 - -
Vimu11g00650 1531 ProSiteProfiles dnaJ domain profile. 1448 1513 IPR001623 -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 640 673 - -
Vimu11g00650 1531 MobiDBLite consensus disorder prediction 838 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00650 Vimu-Chr11 6961231 6968373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00650 - - var:108328718 2698.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02984 7 25153717 25154127 Vimu11g00650 11 6961231 6968373 PCT