Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00648 ATGGCTTCTTCCATATGTGCTCTCTCTCCTTCCGTCCCATCACACCTCACTAAAACCACTCTCCCTCTTTTTCAAGGAAGCAAGTGCGAAATGAGCCGGAGGACTTTTGCGGTTAAGGGAATTGTGGCCTCCGGCGTTTCGGTCTCCTCTTCCACTCTCACCGCGGAAACTCTGCCGTCTTCCAAAGGTTTTGAAAGATTACCGTACAAAGCAGAAGGGTACAATTATTGGACATGGAGGGGTCATAAAATACACTACGTTGTGCAAGGAGAAGGTTCCCCCATTGTTCTTATTCATGGTTTTGGGGCCTCTGCGTTCCACTGGAGGTTTTGCGTCCTTGTTCGTATTCGGTTTAGACGGGGATCGGAATCTACATGGAATGACCGAATGAAAGTACACGGAGAAAATGAACCCGACCTTTTACAGTACAACATTCCAGAATTGGCTAAGAAACATAAGGTATATGCCATAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTTATCGATTATGATGCCATGGTGTGGAGGGATCAAGTGGTGGACTTCGTGACGGAAATAGTAAAAGAACCAGCAGTTTTAGTTGGAAATAGCCTCGGAGGATTTACTGCTTTGGTTGCAGCAATTGGGTTGCCTGAGCTTGTAAATGGAGTTGCTCTACTAAATTCTGCTGGACAATTTGGTGATGAGAAAAGGGAAAGTAAAACTTCTGAAGAAACAGCTCTACAAAAGTTTGTCCTAAAGCCTTTGAAGGAAGTTTTCCAACGTGTAGTTCTTGGATTTTTGTTCTGGCAGGCAAAGCAACCAGCTCGCATTTTGTCAGTTCTAAAAAGTGTGTATATAAATTCTTCCAATGTGGATGACTATCTCGTGGAATCTATAACAAGGCCAGCTCAAGATCCAAATGCTGGAGAAGTTTATTACAGGTTAATGACACGTTTCATGATGAATCAGAGCAAGTACACTCTAAATGCTGTCTTAAGTGAACTATCTTGCCCGTTATTGTTGCTCTGGGGCGACCTTGACCCTTGGGTTGGTCCAGGAAAGGCTAATCGAATCAAAGAGTTCTATCCAAAAACGACTCTTGTAAACTTGCAGGCCGGGCATTGTCCACATGATGAGATACCAGAGCTTGTGAACAAGGCTTTATTGGATTGGTTGACAACCCTCACACCTGAAGTGACTCTCCAAACTGTTTGA 1203 0.4414 MASSICALSPSVPSHLTKTTLPLFQGSKCEMSRRTFAVKGIVASGVSVSSSTLTAETLPSSKGFERLPYKAEGYNYWTWRGHKIHYVVQGEGSPIVLIHGFGASAFHWRFCVLVRIRFRRGSESTWNDRMKVHGENEPDLLQYNIPELAKKHKVYAIDLLGFGWSDKALIDYDAMVWRDQVVDFVTEIVKEPAVLVGNSLGGFTALVAAIGLPELVNGVALLNSAGQFGDEKRESKTSEETALQKFVLKPLKEVFQRVVLGFLFWQAKQPARILSVLKSVYINSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLNAVLSELSCPLLLLWGDLDPWVGPGKANRIKEFYPKTTLVNLQAGHCPHDEIPELVNKALLDWLTTLTPEVTLQTV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00648 400 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 25 110 - -
Vimu11g00648 400 Pfam Alpha/beta hydrolase family 95 382 IPR000073 -
Vimu11g00648 400 Gene3D alpha/beta hydrolase 73 391 IPR029058 -
Vimu11g00648 400 PRINTS Alpha/beta hydrolase fold signature 209 222 IPR000073 -
Vimu11g00648 400 PRINTS Alpha/beta hydrolase fold signature 195 208 IPR000073 -
Vimu11g00648 400 PRINTS Alpha/beta hydrolase fold signature 151 166 IPR000073 -
Vimu11g00648 400 SUPERFAMILY alpha/beta-Hydrolases 75 388 IPR029058 -
Vimu11g00648 400 FunFam Alpha/beta fold hydrolase 130 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00648 Vimu-Chr11 6930666 6933712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00648 94 378 Acyl Lipid Metabolism Gene Families AT3G10840 22.840 1.72e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00648 - - gmx:100776976 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00648 11 6930666 6933712 Vimu11g00648 11 6930666 6933712 ECH