Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00645 ATGGCAGCAGAATCATCAGAGGGTGAAGAAGAAACGAAGTTGAGTGGAGGAAACCAATTGTTGACGGTAGACGATGACTTAACGGAGATGGGTAAAAAGGCCGCTTGGAGTGTCAGTTCTTGCAAACCCGGTAACGGTGTTTCCTCTCTCCGTGATGATAATCTCGAAACCTATTGGCAATCCGACGGAGCGCAACCCCATTTGGTTAACATTCAGTTTCAGAAGAAAGTGAGACTTCAACTAATTGTGCTGTACGTGGATTTCAAGTTGGACGAGAGTTACACGCCGAGCAAAGTTTCCATCCGTGCCGGTGATGGGTTTCACAACTTGAAGGAGATTAAGACCGTGGAACTTGTGAAGCCAACTGGGTGGGTCTATATATCGTTGTCTGGAGTTGATCCTAGGGATACCTTTGTGAACACTTTCATGTTGCAAATTGCTGTGTTGTCGAACCATCTCAATGGAAGAGATACTCATTGCTCTATAGTAGAAGCTGCAGATTCAGCTATTACTAGATATTTTCCTTGTGATGATATGGCTTCCGAAACCCATACCGATTTTCACATAAATCCTTCCAATGCTTTCTTCCTCCATTCAAATGAAAATCCAACCTTTGTTCTTGTTTCTCCTCTGTTAGATGGCAAGAATCGACTCGAGCTATGA 663 0.4374 MAAESSEGEEETKLSGGNQLLTVDDDLTEMGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHLVNIQFQKKVRLQLIVLYVDFKLDESYTPSKVSIRAGDGFHNLKEIKTVELVKPTGWVYISLSGVDPRDTFVNTFMLQIAVLSNHLNGRDTHCSIVEAADSAITRYFPCDDMASETHTDFHINPSNAFFLHSNENPTFVLVSPLLDGKNRLEL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00645 220 Pfam Anaphase-promoting complex, subunit 10 (APC10) 19 187 IPR004939 -
Vimu11g00645 220 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Vimu11g00645 220 PANTHER ANAPHASE-PROMOTING COMPLEX 10 8 160 IPR016901 GO:0005680|GO:0031145
Vimu11g00645 220 MobiDBLite consensus disorder prediction 1 20 - -
Vimu11g00645 220 FunFam Anaphase-promoting complex subunit 10 1 166 - -
Vimu11g00645 220 Gene3D - 1 165 - -
Vimu11g00645 220 SMART APC10_2 27 182 IPR004939 -
Vimu11g00645 220 CDD APC10 29 159 IPR016901 GO:0005680|GO:0031145
Vimu11g00645 220 SUPERFAMILY Galactose-binding domain-like 22 159 IPR008979 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00645 K03357 - gmx:100526925 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00645 11 6908086 6910511 Vimu11g00645 11 6908086 6910511 ECH