Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00627 ATGCCTACAAAAAAGCCACCCTTCAAGATAATTCTGGGCTCTTCTTCCAAGGCTCGTAGAGAGATTCTTTCTGAGATGGGATACGAGTTCACAATAATGACTGCAGACATTGATGAGAAAAGTATTAGGAGGGAAAAGCCAGAAGATTTGGTAATGGCATTAGCTGAGGCAAAGGCTGATGCTATTGTGCAAAGGCTCCCAACTGGAGGTGGATTGGAGGAAGATGATTCTACAACACTGCTAATTACTGCAGACACGGTTGTGGTGTATCGGGGAATAATCAGGGAAAAACCCACCAGTGAAAAGGAAGCACGTGAATTCATCAAAGGTTTGCAGTTGGACAGATTTACTACCCTGCTTTTGTTGTCACGGTTATTGACAGATTTAACAGCCAGTAGTCGAATATTTGCAGGATACTCTGGCAGTCATGCAGCAGTGGTAGGATCTGTTGTAGTAACTAACCTTGCAACTGGAAAACGTTGTGGGGGATGGGACAGTGCAGAGGTTTACTTCCTTGAAATTCCAGATGAGGTCATTGATAATCTGATTGACGAAGGAATTACATTCAACGTTGCTGGAGGGTTGATGCTGGAACATCCATTGACATTACCCTTTGTGGATGCTGTAGTTGGATCAACTGATACAGTGATGGGACTTTCCAAAGCTCTTACGGAGAAACTCTTCTTGGAAGCTCAATAG 699 0.4363 MPTKKPPFKIILGSSSKARREILSEMGYEFTIMTADIDEKSIRREKPEDLVMALAEAKADAIVQRLPTGGGLEEDDSTTLLITADTVVVYRGIIREKPTSEKEAREFIKGLQLDRFTTLLLLSRLLTDLTASSRIFAGYSGSHAAVVGSVVVTNLATGKRCGGWDSAEVYFLEIPDEVIDNLIDEGITFNVAGGLMLEHPLTLPFVDAVVGSTDTVMGLSKALTEKLFLEAQ 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00627 232 PIRSF Maf 3 137 IPR003697 GO:0047429
Vimu11g00627 232 PIRSF Maf 127 232 IPR003697 GO:0047429
Vimu11g00627 232 SUPERFAMILY ITPase-like 8 228 IPR029001 -
Vimu11g00627 232 Pfam Maf-like protein 133 228 IPR003697 GO:0047429
Vimu11g00627 232 Pfam Maf-like protein 9 112 IPR003697 GO:0047429
Vimu11g00627 232 FunFam Maf-like protein, expressed 1 120 - -
Vimu11g00627 232 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 9 230 IPR003697 GO:0047429
Vimu11g00627 232 Hamap dTTP/UTP pyrophosphatase. 9 232 IPR003697 GO:0047429
Vimu11g00627 232 Gene3D - 3 130 IPR029001 -
Vimu11g00627 232 Gene3D - 131 230 IPR029001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00627 Vimu-Chr11 6752211 6755324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00627 - - gmx:100802151 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00627 11 6752211 6755324 Vimu11g00627 11 6752211 6755324 ECH